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SCN18_10_11_15_R3_B_scaffold_1030_4

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5491..6891)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] id=12494042 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 466.0
  • Bit_score: 937
  • Evalue 2.60e-270
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 466.0
  • Bit_score: 826
  • Evalue 2.40e-237
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:AAZ98525.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 466.0
  • Bit_score: 826
  • Evalue 1.20e-236

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGCACCTACATATCCTCGGCATCTGCGGCACCTTCATGGGCGGCATCGCCGCCATCGCCCGCGCCGCCGGCCACACCGTCACCGGTTGCGACGCCAACGTCTACCCGCCGATGTCCGACCAGCTGCGCGCGCTCGGCATCGATCTCATCGAAGGCTACGACGCCAAACAAGCCGGCATCAAGGCCGACATCTTTGTCGTCGGCAACGTCGTCACCCGCGGCAACCCGCTGATGGAGGCCATTCTCGAACGCAACCTCGCCTACACCTCCGGCCCGCAATGGCTGGCCGACAACGTCCTGCACGACAAATGGGTGCTGGCAGTGGCGGGCACCCACGGCAAGACCACCACCGCCGCGATGCTGGCGTGGATCCTCGACGACGCCCGCATGCGTCCGGGCTTCCTCATCGGCGGCGTGCCGCAGAATTTCGAAGTCTCTGCCCGGCTGACCGACAGCCCCTTCTTCGTCATCGAAGCCGACGAATACGACACCGCCTTCTTCGACAAGCGCTCCAAGTTCGTCCACTACCGCCCGCGCACCGTCATCCTCAACAACCTCGAGTACGACCATGCCGACATCTTCCCCGATCTCGCCGCCATCGAGACCCAGTTTCACCACCTCGTGCGTACCGTGCCCGGCAACGGCCTCATCGTCGCCAACGGCCGCGCGCCCGCACTCGAGCGCGTATTCGAACGCGGTTTGTGGACCCCGGTAGAACGTTTCGACAACGCCGGTGGCTGGAGCACCGGCGAGCCCGACGCCGACGGCAGCTTCGACGTCCTGTTCGACAGCGTGCCGCAGGGCCGCGTGAACTGGACGCTCATCGGCGAACACAACCGCATGAATGCGCTCGCCGCCATCGCCGCCGCCCGCCATGCCGGCGTGCCCGCCGCCGCCGCGATCGACGCCTTGAGCCGCTTCGAGAACGTCAAGCGGCGCATGGAAATTCGCGGCAGCGTGCACGGCATCACCGTCTACGACGATTTCGCCCACCATCCCACCGCCATCGCCACCACTGTCGAAGGCCTGCGCCGCAAGGTCGGAACAGCGCGCATCCTCGCTGTACTCGAGCCGCGCTCCAACACCATGAAACTCGGCGTCATGAAAGCTGCGCTGCCTGCCAGCCTCGCCGGTGCCGACCTCGTCTACTGCTACGGCGCCACCCTCGGCTGGGACGCGCGCGAAGCGCTCGCCCCGCTCGGCGCCAGGGCGCGCGTGTTCGACGATCTCGACACGCTCGTCGCGCAGCTCGTCGAAGACGGCCGCCCCGACGACCACGTGCTGATGATGAGCAACGGCGGCTTCGGCGGCATCCACGCCAGGCTGCTGGATGCGCTGCATCATCACTATCACGAGGATATTGTGCTGATGCCGATGCATCGGCATGGGGGGTATGCGTAA
PROTEIN sequence
Length: 467
MHLHILGICGTFMGGIAAIARAAGHTVTGCDANVYPPMSDQLRALGIDLIEGYDAKQAGIKADIFVVGNVVTRGNPLMEAILERNLAYTSGPQWLADNVLHDKWVLAVAGTHGKTTTAAMLAWILDDARMRPGFLIGGVPQNFEVSARLTDSPFFVIEADEYDTAFFDKRSKFVHYRPRTVILNNLEYDHADIFPDLAAIETQFHHLVRTVPGNGLIVANGRAPALERVFERGLWTPVERFDNAGGWSTGEPDADGSFDVLFDSVPQGRVNWTLIGEHNRMNALAAIAAARHAGVPAAAAIDALSRFENVKRRMEIRGSVHGITVYDDFAHHPTAIATTVEGLRRKVGTARILAVLEPRSNTMKLGVMKAALPASLAGADLVYCYGATLGWDAREALAPLGARARVFDDLDTLVAQLVEDGRPDDHVLMMSNGGFGGIHARLLDALHHHYHEDIVLMPMHRHGGYA*