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SCN18_30_10_14_R4_P_scaffold_1091_21

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: 20417..20953

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J5N8_COMT2 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 174.0
  • Bit_score: 210
  • Evalue 8.40e-52
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930, ECO:0000313|EMBL:KJB95736.1}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 168.0
  • Bit_score: 215
  • Evalue 3.70e-53
Kelongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 174.0
  • Bit_score: 210
  • Evalue 2.40e-52

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGACGACGACGAACGGCCGATGCTGGCCCTGGGCGGCAAGGTCTACATGACGCCCGAGGGGCACCGGCGGTTGCGGGACGAGTGGCACCAGTTGATGAAGGTCGAGCGGCCGCGCGTCGTGGAGATCGTGTCCTGGGCGGCCGGCAACGGCGACCGCAGCGAGAACGCGGACTACCAGTACGGCAAGCGGCGCCTGCGGGAGATCGACCGGCGCGCACGCTACCTGACGAAGCGGCTCGAGGCTGCGGAGGTGGTGGATCCGGCGCGACAGGCGGTGCGGGACCGCGTGTTCTTCGGTGCGACGGTCACCTATGTGGACGAGGCGGATGTCGAGCGCACCATCACCATCGTCGGCGCGGACGAGGCCGACATGGCGGTCGGCAAGATCAGCCTGACCGCACCGATCGCCGTGGCGCTGATCAAGGCGCGCGCGCAGCGGCACACGGAGGTCGCGGTGCATACGCCGCGCGGCGTCGAGATGATCGAGGTGCTGGACGTGCGCTACCCCGATCCGGAGCAACCCGCGCCCGGCTGA
PROTEIN sequence
Length: 179
MDDDERPMLALGGKVYMTPEGHRRLRDEWHQLMKVERPRVVEIVSWAAGNGDRSENADYQYGKRRLREIDRRARYLTKRLEAAEVVDPARQAVRDRVFFGATVTYVDEADVERTITIVGADEADMAVGKISLTAPIAVALIKARAQRHTEVAVHTPRGVEMIEVLDVRYPDPEQPAPG*