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SCN18_30_10_14_R4_P_scaffold_1297_11

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: 11621..12073

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVV5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 112.0
  • Bit_score: 139
  • Evalue 2.00e-30
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EYF03241.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 110.0
  • Bit_score: 141
  • Evalue 9.70e-31
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 108.0
  • Bit_score: 137
  • Evalue 2.80e-30

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGCAGGCGGCAACGATCTCAAGTGCCATCGTGGCGCAGCCGGTTCGCGGAGCCTTCGGCCCGCAGCGCATCGCAGAGACGATGCACCTCCCGGCGGCGCGCTCGTCCGGACTGGCGGCCTGGCAGTTGCGGCGCGCCACGGCCTATCTCGAGCAGCATGCGTGCGAGGCGGTACGGGTCGCGGACCTCGCGGCGATGGTCGGCCTGTCGATCTCCCATTTCGCGCGCGCCTTCAAGGCGTCGACCGGATTGCCGCCGCACCTTTGGCAGACGCAGCGACGGATCCGGACCGCGCAGCAGATGATGATCGCGGGTGAGCAGCCGCTGGTCGAGATCGCGTTGGCGACCGGGTTCTCCGACCAGAGTCACTTCACGCGCGTGTTCCGCGCGCGCACCGGGACGACGCCCGGGGCGTGGCAGCGGCACGTGCGGAGCATGTCCGCCGCGGCCTGA
PROTEIN sequence
Length: 151
MQAATISSAIVAQPVRGAFGPQRIAETMHLPAARSSGLAAWQLRRATAYLEQHACEAVRVADLAAMVGLSISHFARAFKASTGLPPHLWQTQRRIRTAQQMMIAGEQPLVEIALATGFSDQSHFTRVFRARTGTTPGAWQRHVRSMSAAA*