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SCN18_30_10_14_R4_P_scaffold_2236_2

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: 347..742

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Variovorax sp. CF313 RepID=J2KWA2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 113.0
  • Bit_score: 118
  • Evalue 3.20e-24
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL77303.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 113.0
  • Bit_score: 118
  • Evalue 4.50e-24
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 124.0
  • Bit_score: 114
  • Evalue 2.20e-23

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGACGGAAGCGGCGCGCCGTTGCCCCGCGCAACGGCGTGCCGCGACGGGGCAGGGGCTGTCGCCGAGGCAAGCGGCGGAGGTGCGTTCGTTCCTCCTGGCCGCCCCACCCGACAGGCTTTCCGTCGCGGCGGCGGCGACGCGCTGCCGCCTCTCCCGCAGTCACTTCATCCGGGCGTTCCGGGTCACGTTCGGGCGCACGCCGCACCAGTGGCTGCTGGCGTGCCGGGTGCAGCGGGCCAAGGCGCTGTTGCTGGGTCCGCTGCCGATCGCGGACATCGCGTTGGAACTCGGCTTCGCGGACCAGAGCCACTTCACGCGGGTGTTCACGCGGCATGCCGGCGTGCCGCCTGGCCTGTGGCGCCGCCAGCAGGCGGGGCGCAGCCGAGGGTCCTGA
PROTEIN sequence
Length: 132
MTEAARRCPAQRRAATGQGLSPRQAAEVRSFLLAAPPDRLSVAAAATRCRLSRSHFIRAFRVTFGRTPHQWLLACRVQRAKALLLGPLPIADIALELGFADQSHFTRVFTRHAGVPPGLWRRQQAGRSRGS*