ggKbase home page

SCN18_30_10_14_R4_P_scaffold_3993_3

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(4041..4979)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IFM0_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 293.0
  • Bit_score: 472
  • Evalue 2.10e-130
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 293.0
  • Bit_score: 472
  • Evalue 5.90e-131
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB94231.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 293.0
  • Bit_score: 472
  • Evalue 2.90e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGACCGTCTCGATGCCATGCGCGTGTTCGCTCGGGTGCTGGAGCGAGGCAGTTTCGTGCGCGCGGCCGAGGATCTCGGTCTGTCGGCCTCCAGCGCGACGGACGCGGTGAAGCAACTCGAAGCGCGGCTGAAGGTGCGGTTGCTCCAGCGCACGACCCGCCAGGTGCGCGCGACGCCGGATGGCGAGGAGTATTACCGCCGCTGCCTGGCGATCCTCGCCGACGTCGAGGAGGCGGAGAGTGGCTTCAGCGGCGCGCGCCCGCGGGGCTTGTTGCGCGTCGACGTGCAGGGCTCGCAGCTGCGACGGTTCATCCTGCCCGCCTTGCCGCGCTTCCTGGCGGATTACCCCGAGTTGGAGCTGTTCATCGGCGAGACGGACCGGTTCGTCGATCTGGTGCGGGAAGGGATCGACTGCGTCCTGCGGACCGGCGAGCCGAGGGACAGTGACCTGATCGCGCGACGGATCGCGGTGCTGCCCGAGGTGACGGTCGCATCGGCCGCCTATGTGGCGCGCGTCGGACTGCCCCGGCGCTGGGACGCGCTGGACGGGCATCTCATGGTCGGCTTCCACTCCTCCGCGACGGGGGGCGTGCTGCCGCTGGAATTCATGGTGGACGGGGTGCGGCGGACGGTGACGCTGCCCTGCCGGCTGACGGTGAACGGCGCCGACACATATCAGAGCGCGGCCCGCCAGGGTCTCGGGCTGATCCAGGTGCCGCGCTATGCGGTGGAGGGCGGACTGGCCGACGGCACGCTGGTGGAATGCCTGCCGGAGACGCCGCCCTCCTCGACGCCGGTCTACATCCTGTATCCCCGCAGCCGCCAGCTCAGCCTGCGGGTGCGGGTGTTCATCGACTGGGTGGCGGCCGAGTATGCGCGGCAGGTCCGGCTTGGCGCGATCGGGATGCAGGGCGGTCGTGACGTGCCGACGGGGTGA
PROTEIN sequence
Length: 313
MDRLDAMRVFARVLERGSFVRAAEDLGLSASSATDAVKQLEARLKVRLLQRTTRQVRATPDGEEYYRRCLAILADVEEAESGFSGARPRGLLRVDVQGSQLRRFILPALPRFLADYPELELFIGETDRFVDLVREGIDCVLRTGEPRDSDLIARRIAVLPEVTVASAAYVARVGLPRRWDALDGHLMVGFHSSATGGVLPLEFMVDGVRRTVTLPCRLTVNGADTYQSAARQGLGLIQVPRYAVEGGLADGTLVECLPETPPSSTPVYILYPRSRQLSLRVRVFIDWVAAEYARQVRLGAIGMQGGRDVPTG*