ggKbase home page

SCN18_30_10_14_R4_P_scaffold_5031_1

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(1..342)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=634177 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG; 1693 / Kondo 51) (Gluconacetobacter medellinensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 114.0
  • Bit_score: 144
  • Evalue 6.70e-32
Diaminopimelate decarboxylase n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I1K4_GLUXN similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 114.0
  • Bit_score: 144
  • Evalue 4.70e-32
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 114.0
  • Bit_score: 144
  • Evalue 1.30e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGCCGCACCTTCCGCCCCGCTCGATCCCGCCGAGGACCCCTCGCTCGAGGAGCTCGTCGTCGCCCGCCCCTTCCTGTCGCGCCATGCCTTCGACGGGCTGGTGCTGGAAGACGTGCCGCTCTCGTCCATCGCCGACGCGGTGGGCACGCCCACCTGGGTCTACGGCGCCGGCACCATGCGCGCCCGCGCCCGCCATCTGCGCGCGGCGCTGCAGGCGAGCGGCATGGACGTCCATGCCCATTACGCGGTCAAGGCGAACGATCACTTGGCGGTGCTCTCCCTGTTCGCGGCCGAGGGGTTCGGCGCCGACGTGGTCAGCGAGGGCGAGCTTCGCCGCGCC
PROTEIN sequence
Length: 114
MAAPSAPLDPAEDPSLEELVVARPFLSRHAFDGLVLEDVPLSSIADAVGTPTWVYGAGTMRARARHLRAALQASGMDVHAHYAVKANDHLAVLSLFAAEGFGADVVSEGELRRA