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SCN18_30_10_14_R4_P_scaffold_5683_1

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(2..970)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATF2_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 292.0
  • Bit_score: 290
  • Evalue 1.20e-75
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 292.0
  • Bit_score: 290
  • Evalue 3.30e-76
LysR family transcriptional regulator {ECO:0000313|EMBL:ACZ86672.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 292.0
  • Bit_score: 290
  • Evalue 1.60e-75

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
GTGCACCATATCGCCGGGAATATCGTCGTAGCCCGTCCGGAGCTCGATCTGCGGCAGCTCCATGCCTTTGTCGACCTGGCGGAGGAGCTGCATTTCGGGCGCGCCGCCGCGCGGATCGGCATCGCCCAGCCGCCGCTGAGCCAGCAGATCCAGCGACTGGAACGGCGCATGGGCTGCCGCCTGCTGGTGCGCGGCGGGGGAGCGCGCCTCGCGCTGACGCCGGCCGGCCGGGCCATGCTGCCGGCGGCGCGGCAGGCGCTTGCGGAGCTGGAGGCCGGGCTGGGCGCCGCGCGGCGTGCCGCACGCGGCCAGACCGGGCTGCTGCGGATCGGCTTCACACCCTCCATCGCGCTGACCACCCTGCCGCCGCTGGTGCGCGACTTCCGGCAGCGCTACCCCGGCGTCGCCGTGCAGCTGTCGGAACACACCAGCGCCGCGCAACTGGAGATGATCCATGCCGGGCGGCTGGATCTGGGATTCCTGCGCGACCCGCCCGAGGATGCGGGCCTGTCGCGCCATACCGTTGCGCATGAGGCGCTGATCGTGCTGCTGCCCCGCGCGCATCCGCTGGCGGCGGCGCGGCGCGTCGCCCTGGCGGCGCTGGCGGGCGAACCCTTCCTGCTGGTGCGCGCGGCGGCGGGCCCGAGCTTCCGCACGCGGCTGCTGGGCTTCTGCCGGGAGGCGGGGTTCGCGCCCGTGGTCGCACAGGAAGCGGGGGAGTGGTCCACGGTGGCCGGGCTGGTGTCCGCCGGGCTGGGTGTCGCGCTGGCGCCGGCGAGCGTCGCGCGCATCAACCTGCCGGGAATGGTGCACCGGCCGCTGGTGCAGACGCTGCACAGCGAGATCGTGCTGTTCTGGCGCGACACGGCGGCGGACGACGTGCTGCGCAACTTCGTGGCGCTCTGCGAGGCCGCGTCCGCGCGCGGGCCGGCGCCGCGCCCGCGTCAGCGCAGCCCCGCGACCTCCGCG
PROTEIN sequence
Length: 323
VHHIAGNIVVARPELDLRQLHAFVDLAEELHFGRAAARIGIAQPPLSQQIQRLERRMGCRLLVRGGGARLALTPAGRAMLPAARQALAELEAGLGAARRAARGQTGLLRIGFTPSIALTTLPPLVRDFRQRYPGVAVQLSEHTSAAQLEMIHAGRLDLGFLRDPPEDAGLSRHTVAHEALIVLLPRAHPLAAARRVALAALAGEPFLLVRAAAGPSFRTRLLGFCREAGFAPVVAQEAGEWSTVAGLVSAGLGVALAPASVARINLPGMVHRPLVQTLHSEIVLFWRDTAADDVLRNFVALCEAASARGPAPRPRQRSPATSA