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SCN18_14_9_16_R1_B_scaffold_2350_16

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: 16305..17123

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFY4_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 251
  • Evalue 6.60e-64
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 251
  • Evalue 1.90e-64
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN98067.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 251
  • Evalue 9.20e-64

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGATGGCGGACCGGCGGGCACGCGCCCGCCACTCGACGAGCTGCACGCGTTCCGTTCATTCCGGGACGCTCTCGCGGGAGCACGCGAACGGAGAAGACGCTGCTAAGAAGGAGGTCGACGAAAGCGAGGAGGACAGCCCTCTCTCGGATCCGCCCTCCGCACCGTGGAGTGACTTTGCACTTTCACCCGATAGTAGTTCACCATGGCCGGACGTGGCGCTTCCCGACGAGCTCGAAGCCAGACTGATCGAGCGCCTGAGCGCGCGTGACGAACGCGCGTTCAACGAGCTCGTGCAGACCTACGGGCGTCGTGTGTCCGCGCTCGTCCTCCGCATGCTCGGCAACAAGGCGGAGGCGGAGGACCTGACGCAGGAGGTCTTCGTCCAGGTCTTCAAGGCGATCGGCTCGTTCCGAGGCGAGTCGAAGCTGTCGACCTGGATCTATCGAATCGCGGTGAACCTCTGCAAGAACCGCTCGAAGTACCTCAGGGTGCGTCATGCGGGCGAGCAGGACGAGCTCGAGGCCGTGGCGGAGCGAGTTCCGCTCGGCGAAGCTCGACGCGCCAACGTCGCCGTGATCGAACGCCCCGACGAGGCGCTCGGCGGCAAGCAGGTCGAGAAGATCGTCCAGGACGCGATCCAGAAGATCGATCCCGCGTTCCGCGAGTGCCTCATCTTGCGCGACGTCGAGGAGCTCTCCTACGAGGAGATCGAGCAGATCACCGGTCTCGCGGCTGGTACAGTGAAGAGCAGGATCTTCCGGGCACGCGCCCAGCTCAAGGAGATCGTCGAGCGCGAGCTCGGTGAGAAGATCGGATGA
PROTEIN sequence
Length: 273
MMADRRARARHSTSCTRSVHSGTLSREHANGEDAAKKEVDESEEDSPLSDPPSAPWSDFALSPDSSSPWPDVALPDELEARLIERLSARDERAFNELVQTYGRRVSALVLRMLGNKAEAEDLTQEVFVQVFKAIGSFRGESKLSTWIYRIAVNLCKNRSKYLRVRHAGEQDELEAVAERVPLGEARRANVAVIERPDEALGGKQVEKIVQDAIQKIDPAFRECLILRDVEELSYEEIEQITGLAAGTVKSRIFRARAQLKEIVERELGEKIG*