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SCN18_14_9_16_R1_B_scaffold_5065_1

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: comp(56..667)

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8V8_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 181.0
  • Bit_score: 115
  • Evalue 4.20e-23
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:KFE69706.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 205.0
  • Bit_score: 118
  • Evalue 9.10e-24
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 181.0
  • Bit_score: 115
  • Evalue 1.20e-23

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Taxonomy

CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → CN-SCN_Acidobacteria_32x → Acidobacteria

Sequences

DNA sequence
Length: 612
ATGATGGGCCAGCTCGTGCCAATCAGAGAGCCACGCAAGGCTTCGGCCGACCGGCTGGAGGATCGCACCGACGAGGAGCTCATGGCCCTCGTGCGCCTCGGGACGCGCGCGGCCTTCCGGGTCCTCGTCGTGCGCCATGCGGAGAAGGTCGCCGGCTTCTGCGCCCGCGTGACCGGGGTCCGAGCGGCGGCGCCCGAGGTGGCGCAGGAGGTCTGGCTCGCGATCTGGGACACGCGCGATCGCTGGGAGCCCCGCTCGACGTTCCGGTCGTACCTCTACACGGTGGCCTTCACGCGGGCGCGCAATCACGCTCGCTCGCGCCGTCGGATGGCGGCGGTGTTCTCCTCCGAGCCGCTCGAGGCGGACGCCGCGGCCGGATCGGGGAAGCTCGAGATCGACCGCCTGCTCGAGCGCGAGCGGCGCGAGCGCGTGTTCAAGGCAGTGGGGGAGCTGCCCGAGTCGATGCGCGAGGCGGTGATCCTGCGCTTCGTCGATGACCTCTCGTACGAGGAGATGGAAGCGATTCTGGCGGCGAACGCATCGACGTTGCGGTCGCGCGTGCACCATGCGCTCGCACGTCTCAAGGAGCGACTCGGAAAGGAACGCCGATGA
PROTEIN sequence
Length: 204
MMGQLVPIREPRKASADRLEDRTDEELMALVRLGTRAAFRVLVVRHAEKVAGFCARVTGVRAAAPEVAQEVWLAIWDTRDRWEPRSTFRSYLYTVAFTRARNHARSRRRMAAVFSSEPLEADAAAGSGKLEIDRLLERERRERVFKAVGELPESMREAVILRFVDDLSYEEMEAILAANASTLRSRVHHALARLKERLGKERR*