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SCN18_25_8_15_R1_B_scaffold_4408_1

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(233..772)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 178.0
  • Bit_score: 329
  • Evalue 1.80e-87
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380C493 similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 179.0
  • Bit_score: 337
  • Evalue 6.00e-90
clpP2; protease subunit of ATP-dependent Clp protease similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 178.0
  • Bit_score: 320
  • Evalue 2.80e-85

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAACACCCCCACCTTCGGCCTTCCCGCAGCTCCCCAGGGACTGCAGATGCCCGGCAGCCGCTACGTGCTCCCGCAGTTCGAGGAGCGCACCGCATACGGCTACAAGCGTCAGGACCCCTACAACAAGCTGTTCGAGGACCGCGTCATCTTCCTGGGTGTCCAGGTCGACGACGCGTCCGCAGACGATGTCATGGCGCAGCTCCTCGTGCTCGAGAGCCAGGATCCCGACCGCGACATCATCATGTACATCAACTCGCCCGGCGGCTCGTTCACGGCCATGACGGCGATCTACGACACGATGCAGTACGTCTCGCCGCAGATCCAGACGGTCGTGCTCGGCCAGGCGGCATCCGCCGCGGCCGTGCTCCTCGCCGCCGGCGCACCGGGCAAGCGTCTCGCCCTTCCCAACGCCCGCATCCTGATCCACCAGCCCGCCATGGGCGAGGCCGGTCACGGGCAGGCGTCGGACATCGAGATCCAGGCGAACGAGATCATGCGCATGCGCACGTGGCTCGAGGAGACGCTGGCGAAGCCGTGA
PROTEIN sequence
Length: 180
MNTPTFGLPAAPQGLQMPGSRYVLPQFEERTAYGYKRQDPYNKLFEDRVIFLGVQVDDASADDVMAQLLVLESQDPDRDIIMYINSPGGSFTAMTAIYDTMQYVSPQIQTVVLGQAASAAAVLLAAGAPGKRLALPNARILIHQPAMGEAGHGQASDIEIQANEIMRMRTWLEETLAKP*