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SCN18_25_8_15_R1_B_scaffold_9160_1

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 2..1522

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037AC5CB similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 488.0
  • Bit_score: 754
  • Evalue 4.50e-215
Type 4 fimbrial assembly protein PilB {ECO:0000313|EMBL:CDK01030.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 488.0
  • Bit_score: 763
  • Evalue 1.30e-217
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 487.0
  • Bit_score: 597
  • Evalue 3.40e-168

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Taxonomy

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1521
CGCGCGTTCGTCGTTTGCAGCGTCGTGCGCCAGGGCTTCATACAGCGCCACGGCGATCCCGATGTCATCGCGATGGTGCCCAGTGCCCTGTGTCGCCGCTACCAGCTCCTGCCGATCGAACGATCCCGTCGCGGACTCGGGGTGGCGATGCTCGATCCGACGGACATCATCGCCATCGACGACGTCTCCAGCGTCACGGACCTGCAGGTCCGTCCGCTCGTGGTGGCCGCGGATGCGCTCCGCCAGGCGTTCGACCGCTACCTGCGCTCGGACGAGGAGCTCAGCGATCTCTCGGAGCAGCTCGGCGAGGCCGCCAGCGGTGACATGGTGTCGTTCACCGAATCGCTGGACGACCAGGACGCCGACGCGCCCATCATCCGCTTCGTCAACCTCCTCATCACCCAGGCGATCAACGACAGGGCGAGCGACATCCACATCGAACCGGGAGAGCGACAGCTGACGGTGCGGTTCCGCATCGACGGCGTGCTCCACGAGATGCAGCGGGCCGACCGCGGCATCCAGGACGGGGTCATCTCGCGGCTCAAGATCATGTCGGCCATCGACATCGCGGAGCGACGGCGGCCCCAGGACGGCCGCATCTCGGTCACCCACGAGGGCCGCCAGATCGATCTGCGCGTCGCAACATTGCCGACGGTGTGGGGCGAGAAGATCGTCATGCGCATCCTCGACAACTCCGGCCAGGCGATGTCGATGGGCGATCTGCGGTTCTCGACCGTCAACGAGCAGCGCTTCCGCGAGTCGATCACCCGCCCGCACGGCATGGTGCTCGTGACGGGTCCGACCGGCTCCGGCAAGTCCACGACGCTGTACACCGCGCTGCGCACGGTCGCCAATCCCGCGATCAACGTCATCACGGTCGAGGATCCGGTCGAGTACCGCATCGCCGGCATCAACCAGGTGCAGGTGAATCAGCGCGCGGGCATGACCTTCCAGGCCGCGCTGCGCTCCATCCTGCGCAGCGACCCGGACGTGGTGCTCGTCGGCGAGATCCGGGATCAGGAGACGGCGACGATCTCCATCGAGGCGTCGCTCACCGGCCACCTGGTGCTCTCGACGTTGCACACGAACGATGCTCCGAGCGCCCTCACGCGACTGACCGAGCTCGGTTGCGAGCCGTTCCTCGTCGGCACGGCGCTGACCGCCGTCGTCGCCCAGCGCCTCGCCCGCCGGCTCTGCCAGAACTGCCGCGTCCCGTTCACGGAGCCTTCCGAGGTGCTGACGTCGCTGCGCTTCCCGCACGATCCGCAGGACGTGCCGCAGCTGTACAAGGCGAATGGGTGCCCGGCCTGCTCCGGGACCGGATACCGCGGCCGCGTCGCGCTGCACGAGGTCATGACGGTGACCGAGGAGATGGAGCAGCTCGTCGTCACGCACGCGACGGGCACGGACATGCGCCAGCTCGCGCTTCAGCAGGGGATGGTCGGCCTGCGGGAGGACGGCTGGAGCAAGGTCGCTCTGGGGCTGACCACGATCGAAGAGGTTTTGCGCGTCTCGGTGTGA
PROTEIN sequence
Length: 507
RAFVVCSVVRQGFIQRHGDPDVIAMVPSALCRRYQLLPIERSRRGLGVAMLDPTDIIAIDDVSSVTDLQVRPLVVAADALRQAFDRYLRSDEELSDLSEQLGEAASGDMVSFTESLDDQDADAPIIRFVNLLITQAINDRASDIHIEPGERQLTVRFRIDGVLHEMQRADRGIQDGVISRLKIMSAIDIAERRRPQDGRISVTHEGRQIDLRVATLPTVWGEKIVMRILDNSGQAMSMGDLRFSTVNEQRFRESITRPHGMVLVTGPTGSGKSTTLYTALRTVANPAINVITVEDPVEYRIAGINQVQVNQRAGMTFQAALRSILRSDPDVVLVGEIRDQETATISIEASLTGHLVLSTLHTNDAPSALTRLTELGCEPFLVGTALTAVVAQRLARRLCQNCRVPFTEPSEVLTSLRFPHDPQDVPQLYKANGCPACSGTGYRGRVALHEVMTVTEEMEQLVVTHATGTDMRQLALQQGMVGLREDGWSKVALGLTTIEEVLRVSV*