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SCN18_25_8_15_R1_B_scaffold_21190_2

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(317..955)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B467CA similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 210.0
  • Bit_score: 284
  • Evalue 5.50e-74
TetR family transcriptional regulator {ECO:0000313|EMBL:KDA07025.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 213.0
  • Bit_score: 275
  • Evalue 4.70e-71
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 192.0
  • Bit_score: 157
  • Evalue 3.70e-36

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGTCAAGCATGAGTTCCCCGACCGCACCGGCCCCCGCATCCGACACCCCCCGACGGCTCTCCTCGGACGAGCGGCGGGAGCAGATCGTCCGTGCCGCGATCGCCGTCTTCGGTGCCCGGGGGTACGTCGGCGCCACCACCGACGAGGTGGCGAAGGCCGCGGGCGTCAGCCAGCCCTACGTCGTCCGCCTGTTCGGGTCGAAGGAGAGCCTCTTCCTCGCCGCCCTCGACGAGTGCCTCGCGCTCCTGCTGTCTGCGTTCCGCGCCGCGGTGGACGACACGACCGCCGAGGACCCGCTGCAGAGGCGGATCGGTCACGCCTACGTCGGCCTGCTCGAGGTGCGCGGCCTGCATCAGACCCTGTCGCACGCGTTCCTGCTCGGGGCCCATCCCGTGATCGGCCCCCGCGCCCGCGACGGCTTCGCCCGCGTGTGGGCGTTCATCCGCAATGCGGGGTTCGACCCCGAGGCCGCGCGGGAGTTCCTCGCGGAGGGGATGCTGATCACGACGATGATCGGGCTGCGCCTCGTCGACGATTACGACCGTGACCCCCGGATCACCGAGATGTTCGAGACCTGCTTCCCGAGCAAGCTCGCCCAGGTGCTGGAGATCAGCCCCCGCGGCGACGACCCCTGGTGA
PROTEIN sequence
Length: 213
MSSMSSPTAPAPASDTPRRLSSDERREQIVRAAIAVFGARGYVGATTDEVAKAAGVSQPYVVRLFGSKESLFLAALDECLALLLSAFRAAVDDTTAEDPLQRRIGHAYVGLLEVRGLHQTLSHAFLLGAHPVIGPRARDGFARVWAFIRNAGFDPEAAREFLAEGMLITTMIGLRLVDDYDRDPRITEMFETCFPSKLAQVLEISPRGDDPW*