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SCN18_25_8_15_R1_B_scaffold_18560_1

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 1..432

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A13E8 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 137.0
  • Bit_score: 235
  • Evalue 3.40e-59
Transcriptional regulatory protein LiaR {ECO:0000313|EMBL:KJL34644.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 143.0
  • Bit_score: 234
  • Evalue 8.00e-59
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 137.0
  • Bit_score: 231
  • Evalue 8.00e-59

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 432
GTCATCATCCACAGCGTGGCCGACCGCCCTGCTGCGGTGCGCGAGGCGCTCGCGGCCGGCGCCGCCGGCATCATCAGCAAGTCGTCGCCCATCGACGAGGTGATCGCCGCGGTGAGCACTGTCGCCCGCGGCGAGCTGCTCAACAACGTCGAGTGGGCCAGCGCGGTCGACGGCGACCGGGCGTTCGCGGACGCCCAGCTGTCGGCGCGCGAGCGCGAGGTGCTGCGGCTGTACGCCGCCGGACTTCCGCTCAAGGTCGTCGCCGAACGGCTCGGAGTCGCGTATTCGACGGCGAAGGAGAACATCACGCGCGTCCGCATGAAGTACGTCGAGGTGGGCCGGCCCGCTCCGACGAAGGTGGACCTGCTGCGCCGCGCCGTCGAAGACGGGATCCTCTCGCAGATCGAAGAGGAAGAAGACGGTGACAGCTGA
PROTEIN sequence
Length: 144
VIIHSVADRPAAVREALAAGAAGIISKSSPIDEVIAAVSTVARGELLNNVEWASAVDGDRAFADAQLSAREREVLRLYAAGLPLKVVAERLGVAYSTAKENITRVRMKYVEVGRPAPTKVDLLRRAVEDGILSQIEEEEDGDS*