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SCN18_26_2_15_R5_F_SCN_Thiomonas_15x_64_14

SCN18_26_2_15_R5_F_unknown_64_14
In projects: SCN18_26_2_15_R5_F  |  scn18_genomes

Consensus taxonomy:

Description

SCN18_26_2_15_R5_F_abawaca_040

Displaying items 101-150 of 175 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_F_scaffold_2413
Species: SCN_Thiomonas_15x (75%)
8 7229 bp 61.13 13.78 78.64
SCN18_26_2_15_R5_F_scaffold_2161
Species: SCN_Thiomonas_15x (100%)
8 8328 bp 63.75 12.52 86.49
SCN18_26_2_15_R5_F_scaffold_2697
Species: SCN_Thiomonas_15x (50%)
8 6168 bp 60.07 9.46 92.61
SCN18_26_2_15_R5_F_scaffold_2463
Species: SCN_Thiomonas_15x (100%)
8 7039 bp 64.10 12.91 89.08
SCN18_26_2_15_R5_F_scaffold_1851
Species: SCN_Thiomonas_15x (57.14%)
7 10198 bp 67.01 13.40 91.66
SCN18_26_2_15_R5_F_scaffold_2372
Species: SCN_Thiomonas_15x (100%)
7 7430 bp 65.21 15.91 94.80
SCN18_26_2_15_R5_F_scaffold_2668
Species: SCN_Thiomonas_15x (85.71%)
7 6260 bp 64.94 14.64 94.79
SCN18_26_2_15_R5_F_scaffold_2963
Species: SCN_Thiomonas_15x (85.71%)
7 5472 bp 66.12 13.65 95.23
SCN18_26_2_15_R5_F_scaffold_3430
Species: SCN_Thiomonas_15x (83.33%)
6 4595 bp 66.46 11.26 91.34
SCN18_26_2_15_R5_F_scaffold_2586
Species: SCN_Thiomonas_15x (100%)
6 6544 bp 60.70 12.58 99.25
SCN18_26_2_15_R5_F_scaffold_2331
Species: SCN_Thiomonas_15x (83.33%)
6 7615 bp 63.57 14.64 97.82
SCN18_26_2_15_R5_F_scaffold_3487
Species: SCN_Thiomonas_15x (100%)
6 4508 bp 68.54 14.04 97.36
SCN18_26_2_15_R5_F_scaffold_4543
Species: SCN_Thiomonas_15x (100%)
6 3331 bp 60.37 10.58 94.57
SCN18_26_2_15_R5_F_scaffold_2663
Species: SCN_Thiomonas_15x (100%)
6 6272 bp 65.29 11.65 92.65
SCN18_26_2_15_R5_F_scaffold_4071
Species: SCN_Thiomonas_15x (66.67%)
6 3761 bp 66.07 9.61 89.98
SCN18_26_2_15_R5_F_scaffold_3037
Species: SCN_Thiomonas_15x (100%)
6 5319 bp 67.27 13.59 98.65
SCN18_26_2_15_R5_F_scaffold_9564
Phylum: Proteobacteria (50%)
6 1716 bp 50.47 6.38 102.16
SCN18_26_2_15_R5_F_scaffold_2725
Species: SCN_Thiomonas_15x (83.33%)
6 6087 bp 64.01 13.78 92.21
SCN18_26_2_15_R5_F_scaffold_2737
Species: SCN_Thiomonas_15x (80%)
5 6060 bp 62.08 12.43 87.72
SCN18_26_2_15_R5_F_scaffold_3951
Species: SCN_Thiomonas_15x (80%)
5 3880 bp 64.10 13.57 97.35
SCN18_26_2_15_R5_F_scaffold_7346
Species: SCN_Thiomonas_15x (100%)
5 2115 bp 62.74 9.93 82.27
SCN18_26_2_15_R5_F_scaffold_3713
Species: SCN_Thiomonas_15x (100%)
5 4187 bp 67.21 13.94 96.30
SCN18_26_2_15_R5_F_scaffold_10941
Species: SCN_Thiomonas_15x (100%)
5 1554 bp 64.09 4.15 89.00
SCN18_26_2_15_R5_F_scaffold_3999
Species: SCN_Thiomonas_15x (100%)
5 3828 bp 65.60 13.68 90.99
SCN18_26_2_15_R5_F_scaffold_4329
Species: SCN_Comamonas_36x (100%)
5 3516 bp 60.15 12.80 92.66
SCN18_26_2_15_R5_F_scaffold_3878
Order: Burkholderiales (75%)
4 3966 bp 56.58 12.10 78.06
SCN18_26_2_15_R5_F_scaffold_11823
Species: SCN_Thiomonas_15x (100%)
4 1465 bp 64.44 4.51 92.97
SCN18_26_2_15_R5_F_scaffold_10615
Species: SCN_Thiomonas_15x (100%)
4 1588 bp 60.26 6.14 86.52
SCN18_26_2_15_R5_F_scaffold_5299
Order: Burkholderiales (50%)
4 2858 bp 55.53 9.18 89.33
SCN18_26_2_15_R5_F_scaffold_16451
Species: SCN_Thiomonas_15x (100%)
4 1146 bp 60.56 3.66 71.99
SCN18_26_2_15_R5_F_scaffold_13167
Species: SCN_Thiomonas_15x (100%)
4 1352 bp 65.01 3.11 79.66
SCN18_26_2_15_R5_F_scaffold_7158
Phylum: Proteobacteria (50%)
4 2167 bp 56.16 6.99 67.14
SCN18_26_2_15_R5_F_scaffold_11214
Species: SCN_Thiomonas_15x (100%)
4 1526 bp 65.66 3.54 106.55
SCN18_26_2_15_R5_F_scaffold_6193
Species: SCN_Thiomonas_15x (100%)
3 2455 bp 61.14 13.14 88.35
SCN18_26_2_15_R5_F_scaffold_6249
Species: SCN_Thiomonas_15x (100%)
3 2438 bp 65.71 61.46 94.38
SCN18_26_2_15_R5_F_scaffold_5000
Species: SCN_Thiomonas_15x (100%)
3 3013 bp 65.28 12.50 88.12
SCN18_26_2_15_R5_F_scaffold_17242
Species: SCN_Thiomonas_15x (100%)
3 1109 bp 66.82 3.65 100.63
SCN18_26_2_15_R5_F_scaffold_4498
Genus: Thiomonas (66.67%)
3 3362 bp 64.04 12.40 84.77
SCN18_26_2_15_R5_F_scaffold_5804
Species: SCN_Thiomonas_15x (66.67%)
3 2602 bp 63.76 12.39 84.86
SCN18_26_2_15_R5_F_scaffold_4247
Species: SCN_Thiomonas_15x (100%)
3 3594 bp 58.74 10.02 88.98
SCN18_26_2_15_R5_F_scaffold_5854
Species: SCN_Thiomonas_15x (66.67%)
3 2583 bp 62.95 9.06 90.59
SCN18_26_2_15_R5_F_scaffold_18607
Species: SCN_Thiomonas_15x (100%)
3 1050 bp 60.19 5.29 93.14
SCN18_26_2_15_R5_F_scaffold_18618
Species: SCN_Thiomonas_15x (100%)
2 1049 bp 64.06 4.15 38.32
SCN18_26_2_15_R5_F_scaffold_11003
Species: SCN_Thiomonas_15x (100%)
2 1549 bp 64.56 4.65 98.19
SCN18_26_2_15_R5_F_scaffold_14466
Species: SCN_Thiomonas_15x (100%)
2 1262 bp 62.28 5.35 83.68
SCN18_26_2_15_R5_F_scaffold_3349
Species: SCN_Thiomonas_15x (100%)
2 4719 bp 67.77 13.64 97.90
SCN18_26_2_15_R5_F_scaffold_16586
Species: SCN_Thiomonas_15x (100%)
2 1139 bp 64.71 3.69 102.20
SCN18_26_2_15_R5_F_scaffold_5715
Species: SCN_Thiomonas_15x (100%)
2 2640 bp 64.62 13.24 96.48
SCN18_26_2_15_R5_F_scaffold_15305
Species: SCN_Thiomonas_15x (100%)
2 1209 bp 63.19 4.71 96.53
SCN18_26_2_15_R5_F_scaffold_15567
Species: SCN_Thiomonas_15x (100%)
2 1194 bp 66.50 4.27 110.55
Displaying items 101-150 of 175 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.