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SCN18_26_2_15_R5_F_SCN_Thiomonas_15x_64_14

SCN18_26_2_15_R5_F_unknown_64_14
In projects: SCN18_26_2_15_R5_F  |  scn18_genomes

Consensus taxonomy:

Description

SCN18_26_2_15_R5_F_abawaca_040

Displaying items 51-100 of 175 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_F_scaffold_6249
Species: SCN_Thiomonas_15x (100%)
3 2438 bp 65.71 61.46 94.38
SCN18_26_2_15_R5_F_scaffold_1976
Species: SCN_Thiomonas_15x (100%)
9 9395 bp 64.97 15.01 94.10
SCN18_26_2_15_R5_F_scaffold_392
Species: SCN_Thiomonas_15x (85.71%)
49 52980 bp 63.88 12.62 94.05
SCN18_26_2_15_R5_F_scaffold_278
Species: SCN_Thiomonas_15x (95.59%)
68 69438 bp 64.33 13.72 94.01
SCN18_26_2_15_R5_F_scaffold_17406
Species: SCN_Thiomonas_15x (100%)
2 1101 bp 64.40 4.63 94.01
SCN18_26_2_15_R5_F_scaffold_1079
Species: SCN_Thiomonas_15x (95%)
20 19551 bp 61.42 13.76 93.95
SCN18_26_2_15_R5_F_scaffold_1236
Species: SCN_Thiomonas_15x (94.44%)
18 16541 bp 62.70 12.77 93.82
SCN18_26_2_15_R5_F_scaffold_482
Species: SCN_Thiomonas_15x (100%)
40 45127 bp 65.30 15.17 93.81
SCN18_26_2_15_R5_F_scaffold_317
Species: SCN_Thiomonas_15x (93.55%)
62 64249 bp 64.87 13.11 93.74
SCN18_26_2_15_R5_F_scaffold_405
Species: SCN_Thiomonas_15x (95.65%)
46 51542 bp 65.16 14.10 93.68
SCN18_26_2_15_R5_F_scaffold_737
Species: SCN_Thiomonas_15x (100%)
26 29607 bp 65.10 14.27 93.61
SCN18_26_2_15_R5_F_scaffold_1357
Species: SCN_Thiomonas_15x (100%)
18 14823 bp 63.66 13.64 93.38
SCN18_26_2_15_R5_F_scaffold_1033
Species: SCN_Comamonas_36x (100%)
22 20498 bp 68.27 14.43 93.30
SCN18_26_2_15_R5_F_scaffold_248
Species: SCN_Thiomonas_15x (63.77%)
69 76606 bp 65.16 12.78 93.21
SCN18_26_2_15_R5_F_scaffold_18607
Species: SCN_Thiomonas_15x (100%)
3 1050 bp 60.19 5.29 93.14
SCN18_26_2_15_R5_F_scaffold_234
Species: SCN_Comamonas_36x (96.15%)
78 80599 bp 64.18 14.47 93.02
SCN18_26_2_15_R5_F_scaffold_255
Species: SCN_Thiomonas_15x (100%)
62 75042 bp 64.42 14.19 93.01
SCN18_26_2_15_R5_F_scaffold_11823
Species: SCN_Thiomonas_15x (100%)
4 1465 bp 64.44 4.51 92.97
SCN18_26_2_15_R5_F_scaffold_682
Species: SCN_Thiomonas_15x (94.12%)
34 32724 bp 64.04 13.43 92.95
SCN18_26_2_15_R5_F_scaffold_1165
Species: SCN_Thiomonas_15x (66.67%)
15 17642 bp 64.67 13.78 92.93
SCN18_26_2_15_R5_F_scaffold_319
Species: SCN_Thiomonas_15x (85.25%)
61 63985 bp 62.23 13.16 92.87
SCN18_26_2_15_R5_F_scaffold_540
Species: SCN_Thiomonas_15x (82.05%)
39 40867 bp 62.83 13.18 92.80
SCN18_26_2_15_R5_F_scaffold_1662
Species: SCN_Thiomonas_15x (100%)
14 11729 bp 65.64 13.68 92.72
SCN18_26_2_15_R5_F_scaffold_961
Species: SCN_Thiomonas_15x (100%)
21 22205 bp 64.56 14.41 92.71
SCN18_26_2_15_R5_F_scaffold_369
Species: SCN_Thiomonas_15x (96.55%)
58 55777 bp 62.81 13.71 92.70
SCN18_26_2_15_R5_F_scaffold_1489
Species: SCN_Thiomonas_15x (90.91%)
11 13380 bp 63.59 13.30 92.69
SCN18_26_2_15_R5_F_scaffold_4329
Species: SCN_Comamonas_36x (100%)
5 3516 bp 60.15 12.80 92.66
SCN18_26_2_15_R5_F_scaffold_2663
Species: SCN_Thiomonas_15x (100%)
6 6272 bp 65.29 11.65 92.65
SCN18_26_2_15_R5_F_scaffold_2697
Species: SCN_Thiomonas_15x (50%)
8 6168 bp 60.07 9.46 92.61
SCN18_26_2_15_R5_F_scaffold_2131
Species: SCN_Thiomonas_15x (100%)
10 8490 bp 66.82 12.58 92.54
SCN18_26_2_15_R5_F_scaffold_402
Species: SCN_Thiomonas_15x (98.21%)
56 51784 bp 63.72 13.90 92.52
SCN18_26_2_15_R5_F_scaffold_1082
Species: SCN_Thiomonas_15x (94.74%)
19 19488 bp 63.31 13.89 92.50
SCN18_26_2_15_R5_F_scaffold_1162
Species: SCN_Thiomonas_15x (94.12%)
17 17728 bp 63.06 12.87 92.46
SCN18_26_2_15_R5_F_scaffold_838
Species: SCN_Thiomonas_15x (100%)
27 26220 bp 66.14 14.77 92.28
SCN18_26_2_15_R5_F_scaffold_845
Species: SCN_Thiomonas_15x (100%)
26 25876 bp 62.63 12.59 92.24
SCN18_26_2_15_R5_F_scaffold_2725
Species: SCN_Thiomonas_15x (83.33%)
6 6087 bp 64.01 13.78 92.21
SCN18_26_2_15_R5_F_scaffold_963
Species: SCN_Thiomonas_15x (95.24%)
21 22177 bp 63.44 13.97 92.15
SCN18_26_2_15_R5_F_scaffold_1206
Species: SCN_Thiomonas_15x (100%)
15 17023 bp 64.84 15.56 92.13
SCN18_26_2_15_R5_F_scaffold_534
Species: SCN_Thiomonas_15x (100%)
32 41187 bp 65.97 13.83 92.07
SCN18_26_2_15_R5_F_scaffold_1311
Species: SCN_Comamonas_36x (100%)
17 15416 bp 65.80 14.18 91.93
SCN18_26_2_15_R5_F_scaffold_546
Species: SCN_Thiomonas_15x (97.37%)
38 40502 bp 65.02 13.65 91.88
SCN18_26_2_15_R5_F_scaffold_960
Species: SCN_Thiomonas_15x (100%)
22 22333 bp 64.85 13.92 91.87
SCN18_26_2_15_R5_F_scaffold_132
Species: SCN_Comamonas_36x (100%)
130 125173 bp 64.71 14.16 91.86
SCN18_26_2_15_R5_F_scaffold_1293
Species: SCN_Thiomonas_15x (100%)
18 15670 bp 63.56 13.09 91.86
SCN18_26_2_15_R5_F_scaffold_598
Species: SCN_Thiomonas_15x (100%)
38 36508 bp 65.47 15.16 91.85
SCN18_26_2_15_R5_F_scaffold_532
Species: SCN_Thiomonas_15x (90%)
40 41354 bp 62.70 12.49 91.82
SCN18_26_2_15_R5_F_scaffold_1603
Species: SCN_Thiomonas_15x (88.89%)
9 12325 bp 66.93 12.50 91.74
SCN18_26_2_15_R5_F_scaffold_1429
Species: SCN_Thiomonas_15x (100%)
13 13969 bp 62.84 14.08 91.70
SCN18_26_2_15_R5_F_scaffold_1890
Species: SCN_Thiomonas_15x (81.82%)
11 9955 bp 63.43 13.79 91.67
SCN18_26_2_15_R5_F_scaffold_1851
Species: SCN_Thiomonas_15x (57.14%)
7 10198 bp 67.01 13.40 91.66
Displaying items 51-100 of 175 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.