ggKbase home page

SCN18_14_9_16_R4_B_scaffold_523_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1..360)

Top 3 Functional Annotations

Value Algorithm Source
AMP-binding domain-containing protein (Fragment) n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WRQ8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 115.0
  • Bit_score: 149
  • Evalue 1.60e-33
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:KGB52169.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 116.0
  • Bit_score: 175
  • Evalue 2.80e-41
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 113.0
  • Bit_score: 136
  • Evalue 3.90e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGACCGTCACCACCAGCCACGTCCACGGCATCCAGACACCCCCGCTGATCGAGCATACGATCGGCGAGGCGCTGGTGCAGGCCGCCGCGCATTGCGGGGAGCGCGAGGCGCTGGTCTCGGTCGAACAGGGCATTCGCTGGACCTTCGCGGAGTTGCTCGATCGCGCCGATGCCGTCGCCGCCGGTCTCCTCGCGCTCGGGCTCGAGCCCGGCGAGCGGATCGGGATCTGGGCGCACAATTGCGTCGAATGGACCGTCACCCAATTCGCCGCGGCGCGCGCCGGGCTGGTGCTGGTGACGATCAACCCCGCCTATCGCACCAGCGAAGCGGCATTCACGATGGCCAAGGCGGGGCTGGCC
PROTEIN sequence
Length: 120
VTVTTSHVHGIQTPPLIEHTIGEALVQAAAHCGEREALVSVEQGIRWTFAELLDRADAVAAGLLALGLEPGERIGIWAHNCVEWTVTQFAAARAGLVLVTINPAYRTSEAAFTMAKAGLA