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SCN18_14_9_16_R4_B_scaffold_523_8

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(11187..11843)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=2 Tax=Burkholderia cenocepacia RepID=A0KCU7_BURCH similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 213.0
  • Bit_score: 260
  • Evalue 1.10e-66
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 213.0
  • Bit_score: 260
  • Evalue 3.20e-67
TetR family transcriptional regulator {ECO:0000313|EMBL:KGY55406.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 213.0
  • Bit_score: 260
  • Evalue 1.60e-66

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGCTCGAAAAGATGCGAAACGAAGCGCGACGACGGCGACCCCGGAGGATTGGCGCGCCGCCCGACTGGTCCCGACCCAGCAGCGCAGCCGCGAGCGTTATGAACGGATTCTCGCCTGCGCCACCGACGTGATGGCGGAAAAGGGCAGCGATGCCTTTCGGATGAGCGACATCATCGAGCGGACCGGGATGTCGTTCGGCTCGCTCTACCAATATTTCCCCGACAAGACGGCGATCATCGCGACGCTCGCCGAGCGCTGCAACGCGATCGGCCACCAATGCGTCGCGAAGGAATTGAGCGGGCTCACCAGCATCGCCCAATTGCATGCGGTGCTGGGCGCGATCACCGACAGTTATTATCGCTTCTTCATCGACGAGCCGGCGGCGCGCGACATCTGGCAAGCGACCCAGGCCGACAGGATGCTGCAGCAGCTGGACGAGGAGGACGGTCGGCTGCTCACCGGGATGCTGATCGATGCGTTGCGCCCGCTTGCCGCGCAGGTGCCCGAGGAAATGCTCGCCGCCTTCGCGCAGGTGGTGATGGTGACGATGGCCGCGGCGGTGCGCCACGCAATCGCGCTGCCGGACCCCGATGCACGCCAGTTCCTCCTCGTTTTCGAGGCCATGCTGCCGAGCGACCTGCCACCGCAGATCTAG
PROTEIN sequence
Length: 219
MARKDAKRSATTATPEDWRAARLVPTQQRSRERYERILACATDVMAEKGSDAFRMSDIIERTGMSFGSLYQYFPDKTAIIATLAERCNAIGHQCVAKELSGLTSIAQLHAVLGAITDSYYRFFIDEPAARDIWQATQADRMLQQLDEEDGRLLTGMLIDALRPLAAQVPEEMLAAFAQVVMVTMAAAVRHAIALPDPDARQFLLVFEAMLPSDLPPQI*