ggKbase home page

SCN18_14_9_16_R4_B_scaffold_523_15

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 18851..19477

Top 3 Functional Annotations

Value Algorithm Source
Lysine transporter LysE n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HRN7_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 208.0
  • Bit_score: 299
  • Evalue 2.10e-78
Lysine transporter LysE {ECO:0000313|EMBL:EQM78734.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri MF28.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 208.0
  • Bit_score: 299
  • Evalue 3.00e-78
lysine transporter LysE similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 208.0
  • Bit_score: 286
  • Evalue 4.00e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGGCTGACCTTCCCCTGTTTCTCGCCTTTCTCGCGGCGGCGACCGTGCTGACGATCACGCCGGGCGTCGATACCGCGATGATGCTCCGCACCGCGACGGTCGACGGCCGGCGGCCGGCGATCCTTGCCGGGCTGGGCATCACCGTCGGCTGCCTGATCTGGGGCGGGGCGGTGTCTCTGGGGCTCGGCGCGCTGCTGCAGGCGTCGGAGCTGGCCTATGCGATCGTCAAGATCATGGGCGCGGCCTATCTTTGCTGGCTCGGCGCAAAACTGCTGTTCGCGCCGCGGCGGGCGCTGGAGATCATCGGGCAGGCGGCTCCGGCCGCCGGTGGCGGCGCGTTCGTCCGCGGGCTGCTGACCAATTTGCTCAACCCCAAGATCGGGGTATTCTACGTGACCTTCCTGCCGCAATTCGTGCCGATCCATGCCGATGTCGCGCGCTATTCCTTCTTCCTTGCCTGCGTTCATGTCGTGCTGACATTGCTGTGGTTCGCCGCACTGATCGCTGCCGCCATTCCGCTCGGTCGGCTGCTCCGCCGGCCGAAAGCGATCGAACGGCTCGATCGGCTGACGGGGGGGATATTCATCGCCTTCGGGGTGAAGCTCGCCACCTCGTCCGCGCGTTGA
PROTEIN sequence
Length: 209
VADLPLFLAFLAAATVLTITPGVDTAMMLRTATVDGRRPAILAGLGITVGCLIWGGAVSLGLGALLQASELAYAIVKIMGAAYLCWLGAKLLFAPRRALEIIGQAAPAAGGGAFVRGLLTNLLNPKIGVFYVTFLPQFVPIHADVARYSFFLACVHVVLTLLWFAALIAAAIPLGRLLRRPKAIERLDRLTGGIFIAFGVKLATSSAR*