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SCN18_14_9_16_R4_B_scaffold_1188_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(536..1069)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003603246 similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 177.0
  • Bit_score: 303
  • Evalue 9.50e-80
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 177.0
  • Bit_score: 302
  • Evalue 2.30e-79
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 177.0
  • Bit_score: 298
  • Evalue 1.10e-78

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCCGCATCGGCAAAAAGCCGGTCGCGATCCCCTCGGGCGTGACCGCGAACATCAGCGAAGGCATGCTGAGCGTGAAGGGCCCCAAGGGTACCCTGTCGCTCAAGCTCGCCGACGACATCAGCTATGACGTCCAGGCGGACGGCATTTCGGTGCCGCCGGCGACCGCGCCCAAGCGCGCCCGTGCCTTCTGGGGCATGCAGCGCACGCTGGTGCAGAACCTCGTCACCGGCGTGACCGAGGGCTTCACCAAGAAGCTGCTGATCACCGGCGTCGGCTATCGTGCCAACGCGCAGGGGCGGAAGCTGAAGCTGCAGCTCGGCTACAGCCACGACGTCGACATCGACGTGCCGGAAGGTCTTGAGGTCAAGACCCCGGACAACACGACGGTGGAGATTTCGGGCGCCGACAAGCAGAAGGTCGGCCAGCTCGCCGCTGAGATCCGCCGCTGGCGTAAGCCTGAGCCGTACAAGGGCAAGGGCATCAAGTACGACGGCGAATATATCTTCCGTAAGGAAGGGAAGAAGAAGTGA
PROTEIN sequence
Length: 178
MSRIGKKPVAIPSGVTANISEGMLSVKGPKGTLSLKLADDISYDVQADGISVPPATAPKRARAFWGMQRTLVQNLVTGVTEGFTKKLLITGVGYRANAQGRKLKLQLGYSHDVDIDVPEGLEVKTPDNTTVEISGADKQKVGQLAAEIRRWRKPEPYKGKGIKYDGEYIFRKEGKKK*