ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1188_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1822..2406)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030C8738 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 194.0
  • Bit_score: 346
  • Evalue 1.10e-92
50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 194.0
  • Bit_score: 342
  • Evalue 4.40e-92
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000313|EMBL:AJP72858.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 194.0
  • Bit_score: 342
  • Evalue 2.20e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCTGACGCTTACACCGCGCGTCTCAAGAAGCTGTATGACGACACGATCGCCAAGGCGATGACCGAGAAGTTCGGCTATAAGAACGCGCTCGAGATTCCCCGCATCGACAAGATCGTCATCAACATGGGCGTCGGCGAGGCGACCCAGGACAAGAAGCGCGTCGAACAGGCCGCTTCCGAGATGGAATTGATCGCGGGCCAGAAGCCGGTGATCACCAAGGCGAAGAAGTCGATCGCGCAGTTCAAGCTGCGTGAAGGCATGCCGATCGGCGTGAAGGTGACGCTGCGTCGCGAGCGGATGTACGAATTCCTCGACCGCTTCATCACCATCGCACTTCCGCGCGTCCGCGACTTCCGCGGGCTGAACCCGAAGAGCTTCGACGGCCGTGGCAATTACGCCTGCGGTCTGAAGGAGCAGATCGTGTTCCCGGAAATCAACTATGACCGCATCGACAAGGTGCGCGGCATGGACATCATTGTGGCGACGACGGCCAAGACCGACGAGGAAGCGCGTGAGCTGCTTCGTCTGTTCGGCTTCCCGTTCCCGCAGGACGTCCAGGTCGAAGTGAAGCAGGCTGCGTGA
PROTEIN sequence
Length: 195
MADAYTARLKKLYDDTIAKAMTEKFGYKNALEIPRIDKIVINMGVGEATQDKKRVEQAASEMELIAGQKPVITKAKKSIAQFKLREGMPIGVKVTLRRERMYEFLDRFITIALPRVRDFRGLNPKSFDGRGNYACGLKEQIVFPEINYDRIDKVRGMDIIVATTAKTDEEARELLRLFGFPFPQDVQVEVKQAA*