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SCN18_14_9_16_R4_B_scaffold_1130_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(3172..4026)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9DC similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 285.0
  • Bit_score: 317
  • Evalue 7.80e-84
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO40626.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 284.0
  • Bit_score: 292
  • Evalue 3.80e-76
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 283.0
  • Bit_score: 236
  • Evalue 6.50e-60

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Taxonomy

CN-SCN_Sphingomonas_18x → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
GTGGCGGATATTCAGCTGGACTATGTAGTCCCGGATGAAGGCCTTCAGCCTTTTGTCACGCTATTCTATCACTTTACGGCCAATGTGCCGCAGTTCGACGATGTCGAGCGCGCCGATCATGCGCAGTTGCGCTTCCGGCTGAGCGGGGGCGACGGCACGTATCATTTCCCCGACGGGTCGGTGCAGCCCGCGCCCGAGGTGCATGTCGTCGGCCCGACCAGCGGGGCGATGCGGACCTGCGCCGACGGGCCGGTCGAGGTGATCGGCATGGGGCTCCAGCCCGCCGGTTGGGCGGCGCTGATGGGGATCGACGCGTCGACGATGCTCAACCGCGCGATCGACGGCGAATTGTTCTTCGGTGCCGCGGTGCGCCATGTCAGCGACCGGATGCGCGCGGTGAAGACGACCGCCGAAAAGGTCGCGATCGCCGCCACCTTCGTTCAGGGATCGATCGCCGAGGGGGAAAGCAGCGCGGTCACCTTTGCGCGGGAGAGCGACGCGTGGCTGGCCGGCAGGCCGTCGCCCGATATCGAGAAATTGATCTGCGCTACCGGGCTGTCGCGGCGGCAGATCGAGCGGCGGTGCAATGTGCTGTATGGCGCGCCGCCCAAGCTGCTCGCGCGCAAATATCGCGCGCTGCGCGCGGCGGTGGCGCTGGCGAACGGTTCGGCGACGCTGGATCAGTTGCTCGCGGTGGGCTTTTACGATCAGTCGCATCTGATCCGCGAGCTGAAGCAATTCACCGGCCTCACCCCGGGGCAATTGCGCACCGAGCCCAATCGGCTCGCGCAGCTCACGATGGCGCAACGGCTCGCGCTGGGCGGGCAGGTGCATCCGATTATTTCCGACACTTAA
PROTEIN sequence
Length: 285
VADIQLDYVVPDEGLQPFVTLFYHFTANVPQFDDVERADHAQLRFRLSGGDGTYHFPDGSVQPAPEVHVVGPTSGAMRTCADGPVEVIGMGLQPAGWAALMGIDASTMLNRAIDGELFFGAAVRHVSDRMRAVKTTAEKVAIAATFVQGSIAEGESSAVTFARESDAWLAGRPSPDIEKLICATGLSRRQIERRCNVLYGAPPKLLARKYRALRAAVALANGSATLDQLLAVGFYDQSHLIRELKQFTGLTPGQLRTEPNRLAQLTMAQRLALGGQVHPIISDT*