ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1349_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(4303..5757)

Top 3 Functional Annotations

Value Algorithm Source
deoxyribodipyrimidine photo-lyase type I (EC:4.1.99.3) similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 487.0
  • Bit_score: 577
  • Evalue 2.60e-162
Deoxyribodipyrimidine photo-lyase type I n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39EN4_BURS3 similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 487.0
  • Bit_score: 577
  • Evalue 9.30e-162
DNA photolyase FAD-binding protein {ECO:0000313|EMBL:KDB07602.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 489.0
  • Bit_score: 577
  • Evalue 1.00e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGGCCGCCGAATCGCTCCCTTCCGATCCCGACCGTCCCGTCATCCTGTGGTTTCGCGACGACCTTCGCACGTCGGATAATCCCGCGTTGAACGCCGCCGCCGAAAGCGGCCGGAAGATCATCTGCATCTTCGTGCAGGATGAGGCATCAGCCGGGCTCCGCCCGCTCGGCGGCGCCGCGCGCTGGTGGCTTCACGGATCGCTGGAGGCGTTGGACGAAGACCTGCGCCGGCGCGGCGCGGCGCTGGCGATCTACCGCGGACAGGCCCACGCGATCCTGCTCAAGCTTGCCGCCGAAACCCATGCGGCGGCGATATTCTGGAACCGCCGATATGGCGGCGGCGAACGCCAGATCGACGAAGCAATCAAGGCCGCGCTCAAGGCACAGCGGATCGAGGCCAAAAGCTTCAACGGCCATCTGCTCCATGAGCCGTGGACGATCAGGACCAGGGCCGATCAGCCGTTCAAGGTCTTTTCCGCCTTCTGGCGCGCGGTGCATCAGGCCGGCGACCCGGATTTGCCGCTGCCCGCCCCCGCCAGACTGGAATCCTTCTCCGGCGATTATGGCGATGCGCCGCCGCCGGTTCGGCTCGCCGATCTCGCGCTTGAGCCGTCAACGCCCGATTGGGCCGGCGGCCTGCGATCGAGCTGGACGCGCGGCGAGGCCGGCGCGCACGATCAGCTCGGCGGCTTTCTCGATGAGCATATCGGCGATTATGCCGGTTTCAGGGATTTTCCGGCCCGCGCGGTCACCTCGCGCATGTCGCCCTATTTGCGCTTCGGCAATATCTCGGCCCGCCAGATATGGCATGCGGCAAGCGCCGCGACCCACGCCAAGGGCCATGCGACGGCGTATCGCGATCTCGAAAAATTCCAGTCCGAGCTGGGCTGGCGCGAATTTTCCTATCATCTGCTTTACGCCCACCCGGATCTCGCCGAGCGGAACCTGCAATCGCGTTTCGACGCAATGCCGTGGCGAGACGATCCCGCAACATTGCGCGCCTGGCAGACGGGCACGACCGGCTATCCGATCGTCGACGCCGGCATGCGCGAGCTTTGGCATACCGGGTGGATGCACAATCGCGTCCGCATGGTCGTCGCGTCGTTCCTGATCAAGCATCTGCTGATCGACTGGCGCGCGGGCGAGCGCTGGTTCTGGGACACGCTGGTCGACGCCGATCCCGCCAATAATGCGGCAAGCTGGCAATGGGTCGCGGGCAGCGGCGCGGATGCGGCACCCTATTTCCGCGTTTTCAACCCGGTCCTTCAGGGCGAGAAGTTCGACCCCGACGGCAGCTATGTCCGCCGCTGGGTTCCCGAACTCGCCGACGTCTCCGGCGCCGCGATCCATCACCCGTGGGATCTCAAGACCCCGGTTCCGAATTATCCGGCGCGCGTGGTCGAGCATCATTACGCCCGCCAGCGCGCGCTGGATGCCTATAAAGACCTGCGCTGA
PROTEIN sequence
Length: 485
MAAESLPSDPDRPVILWFRDDLRTSDNPALNAAAESGRKIICIFVQDEASAGLRPLGGAARWWLHGSLEALDEDLRRRGAALAIYRGQAHAILLKLAAETHAAAIFWNRRYGGGERQIDEAIKAALKAQRIEAKSFNGHLLHEPWTIRTRADQPFKVFSAFWRAVHQAGDPDLPLPAPARLESFSGDYGDAPPPVRLADLALEPSTPDWAGGLRSSWTRGEAGAHDQLGGFLDEHIGDYAGFRDFPARAVTSRMSPYLRFGNISARQIWHAASAATHAKGHATAYRDLEKFQSELGWREFSYHLLYAHPDLAERNLQSRFDAMPWRDDPATLRAWQTGTTGYPIVDAGMRELWHTGWMHNRVRMVVASFLIKHLLIDWRAGERWFWDTLVDADPANNAASWQWVAGSGADAAPYFRVFNPVLQGEKFDPDGSYVRRWVPELADVSGAAIHHPWDLKTPVPNYPARVVEHHYARQRALDAYKDLR*