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SCN18_14_9_16_R4_B_scaffold_1349_8

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 10315..10989

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHM9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 224.0
  • Bit_score: 264
  • Evalue 6.20e-68
DNA-binding response regulator {ECO:0000313|EMBL:EAT10352.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 224.0
  • Bit_score: 264
  • Evalue 8.70e-68
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 223.0
  • Bit_score: 217
  • Evalue 3.20e-54

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCGCTTGCTTCTGATCGAAGACGATATCGCCATCGCGGATTATATCGTCGGTTGCCTCTCCGCCGCCGGGCATGAGGTGCGGCATGTCGCCGAGGGGCAAGCGGGATTGGTGGAGACCAAGAACGGTCACTTCGATCTCTTGGTCGTCGATCGCATCCTGCCCGATGGCGATGGCGCGTCGGTCGTCGATACGTTGCGAAAATCGGGTTTTACCGACCCCGTGCTGATGCTGACCGCGCTGGGCTCGATCGAGGATCGGGTCGAGGGGCTACGCCACGGGGCGGATGATTATCTGGTCAAACCCTTTGCGCAGGCTGAGCTGATCGCGCGCATCGACGCGTTGTTCCGCCGATCGCGCGGCGCGTTTCAGGATGTCTGCGCCTTCGCTTCGGTGACGATCAATCGCCGCCGCCGCGAGGCGTGGCGCGCGGGCCGCCGGATCACGCTGCATCCGCGCGAATTCGAGCTGCTGGAGCAGCTCGTGCTGCACGAAGGGCGCTATGTGTCCAAGGCGATGATGCTGGAAAACGTCTGGAATTTCCATTTCCACCCGGACACCAACATCGTCGAGACGCATATGAGCCGGCTGCGTCAGAAGCTCAACGCGGGCTTTGCCACCGATGCGATCCAGACGACGCGGCGGGTCGGCTACAGGCTGCGGCATGAGGCCTAG
PROTEIN sequence
Length: 225
MRLLLIEDDIAIADYIVGCLSAAGHEVRHVAEGQAGLVETKNGHFDLLVVDRILPDGDGASVVDTLRKSGFTDPVLMLTALGSIEDRVEGLRHGADDYLVKPFAQAELIARIDALFRRSRGAFQDVCAFASVTINRRRREAWRAGRRITLHPREFELLEQLVLHEGRYVSKAMMLENVWNFHFHPDTNIVETHMSRLRQKLNAGFATDAIQTTRRVGYRLRHEA*