ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1419_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(3..983)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B4AB7 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 316.0
  • Bit_score: 505
  • Evalue 3.00e-140
Tetracycline efflux protein TetA {ECO:0000313|EMBL:CDP51893.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 316.0
  • Bit_score: 511
  • Evalue 4.60e-142
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 316.0
  • Bit_score: 501
  • Evalue 1.20e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
GTGCCACGATCCGATCCTTCTTTGCGCGCCGCGATCAACCAGCCGCTCGTCGTCATTTATGCGGCGATCGGGCTGGACGCGGTCGGCATCGGGCTGATCTTCCCGATCCTTCCGCGGCTGATCGCTGAGGTCACCCACGCGCAGAACATCGCTTCCTATATCGGCATCCTGACCGCGCTCTATGCCGCGATGCAATTCGCCTTCGCCCCGGTGCTCGGCGCGTTGAGCGACCGGCTGGGGCGCCGCCCGGTTCTGCTGCTCTCGCTCGGCGGGGCAGCGGTCAATTATGTGCTGATGGCGCTTGCGCCGTCGCTGGGCTTGCTGATCCTCGGCCGCGCGATCGCCGGGCTGACGAGCGCCAATATCGCGGTCGCCACCGCCTATATCACCGACATTTCGCCGGAGAATGTACGCGCCAAACGCTTCGGGCTGTTCAACGCGATGTTCGGGGTGGGCTTCATCCTCGGGCCGGTGCTGGGCGGTGCGCTCGGCGATTATTGGCTGCGGCTGCCGTTCCTTGCTGCGGCCGCGCTCAACGCCGCCAACCTGCTGCTGGCGCTGTTCGGCCTGCCCGAATCGCGCACGCCGACGCGCGAGAAGATCGACCTTGCCGCGCTCAATCCGCTGCGTCCGCTACGCTGGGCGCTGTCGATGAAGGCATTGCTGCCGATGATCGCGACCTTCTTCGTGCTGAGCGCGACGGGCGAGGTCTATGGCACCTGCTGGGCATTGTGGGGCAATGACGCATTCGGCTGGAACGGCATGTGGGTCGGCCTGTCGCTCGGCGCGTTCGGCGTGTGCCAGACGCTGGCGCAGGCGTTTCTCCCCGGCCCCGCGGTGCGGCTGCTCGGCGAGCGCGGCGCGGTTCTCGCCGGCATCGCCAGCGCCTGCGCCGCGCTGGCGGCGATGGCGTTCATCACGCAGGGCTGGATGGTGTTCGCGATCATGCCACTCGTCGCGCTGTCCGGCATCGGCTCGCCC
PROTEIN sequence
Length: 327
VPRSDPSLRAAINQPLVVIYAAIGLDAVGIGLIFPILPRLIAEVTHAQNIASYIGILTALYAAMQFAFAPVLGALSDRLGRRPVLLLSLGGAAVNYVLMALAPSLGLLILGRAIAGLTSANIAVATAYITDISPENVRAKRFGLFNAMFGVGFILGPVLGGALGDYWLRLPFLAAAALNAANLLLALFGLPESRTPTREKIDLAALNPLRPLRWALSMKALLPMIATFFVLSATGEVYGTCWALWGNDAFGWNGMWVGLSLGAFGVCQTLAQAFLPGPAVRLLGERGAVLAGIASACAALAAMAFITQGWMVFAIMPLVALSGIGSP