ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2768_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2913..4955

Top 3 Functional Annotations

Value Algorithm Source
Surface antigen family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXP9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 686.0
  • Bit_score: 922
  • Evalue 2.20e-265
Surface antigen family protein {ECO:0000313|EMBL:EZP54786.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 716.0
  • Bit_score: 941
  • Evalue 4.80e-271
membrane protein similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 724.0
  • Bit_score: 928
  • Evalue 6.60e-268

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2043
GTGGCGTTTGCGGTTGGTCGTTTATATCCGGTGACAACCGCATTGTTGGTCCTCGCCCCGGTATCGGCGCACGCGCAGGCGGCGCCGGATCCGCAGGATAACAAGCCGATCGTCCCCGATGCCGAGTTCGAAAAGGCGCTCCCGCCGCTGTCGAACGACATCAATGCGCCGCTTGAAGCGATCCAGACGCCGGCGCCGCCGCCCGCGCAGGCCGCCCCGGTCGATCCCGCGCTCGAGCAGCCGCTCGCGCCGATCACCAGCTTCGAGAGTACCCCGCTCGAAACGGCCGCCGACGTGAAGGACAAGGCGGCGCCCGTGATCCACTATGAGACGGTGACGCGCGGACTGGAGGAGATCGGGCTGGCCGGCCAGTTCAAATCCTTGTCCTCGCTGCGCAGCGGCGGCGGCAAGGCGACCAATGCCACGCAGATCAGGGCGCGGGCGCGCGAGGATGAGGCGCTGGCGGTGCGGCTGATGAAGTCGCTCGGCTATTATGACGGCACTGCCGTATCGACGATCGAGCAGGTGCCGAACCAGCCGGGGATGCTCCGCGCGGTGGTCAGCGCGACGCCGGGCAAGCTCTATCACCTCGGCGCGATCAACGTGGTCGCGCCGCCGACCGTGCCGCCGGGGCTGATCCGCGAACAATTGCCGCTCAAGACCGGCGATGCGATCGATGCGCTGCGCATCCAGGGCGCCGAGGCCAATGTCAGCCTCGCCCTGCCGCAACACGGCTATCCCTTCGCCAAGGTCGGGCAGCGCGATATCCTGCTCGATGAGACGACGCTGACCGGCGACTATACCCTCCCGGTCGAGCCCGGTGTGCGTGGATCGTTCGGCGCGCTCCGCACGACCGGCGACAAGATATTCTCGATCAAGCATCTCAACGTCTTCCGGCGCTTCAAGCCGGGCGACCTCTATGACGTGCGGATGACCGACGATCTGCGCAAGGCGCTTGCCGCGACCGCCTTGTTCAATTCGATCTCGGTCGAGCCGGTCGCCACCGGCCAGCCGGGGCCGGACGGCACCGAACTGGTCGATCTGCTCGTCCGCCAGAGCAAGGGGCCGTCGCACAGCCTCGCCGGGACCGCCGGCTATGGAACGGGCGAGGGGTTCAAGCTCGAAGGCACCTGGACGAGCCGTAACATGTTCCCGCCGGAGGGCGCGCTGATCCTCGGCGCGATCGCCGGCACGCAACAGCAGGGCGCCTCCGCCACCTTCCGCCGCGCCAATGCCGGGCAGCGCGATCGCACCTTCTCGATCATCACCAGCGCCAGCCACCAGACCTATGACGCGTTCAACGCGATCACCGGGTCGCTCGCGGTGCGCTGGAGCTACGATTCCACGCCGTTGTGGCAGAAGAAGATCACCTATTTCTACGGCGCCGAACTCACCGGCACCAACGAAAGCGTCTATGATTTCGCGCGTGGCGAGCGGGTGCGTCGCACCTATGGCATCGCGGCGCTGCCGACGCAGATCATGTACGATACCTCGGACGATCTGCTCAATCCGACGCGCGGCTATCGCCTGAAGCTCAACCTCAGCCCGGAAACCTCGGTGCAGGGTGCGGTCGATCCCTATGTCCGCGCGATGCTGGAGGCGACTTTCTATTATCCGGTGTCATCGAGCCTGGTGATTGCCGGGCGGGCGCGAGGCGGATCGATCGTCGGGATTTCGCGCGACGATCTCGCACCGTCGCGGCGCTATTACGGCGGCGGCGGCGGATCGGTGCGCGGCTTCGGTTATCAACGGCTCGGCCCGCTCGATCCGCAGGGCAATCCGGTCGGCGGGCGCAGCCTTAACGAATTCTCGCTCGAGGCGCGCTATCGCTTCGGCAATTTCGGCATCGTGCCGTTCATCGATGCCGGCAATGCGTATGAAAGCGTGCTGCCCAAGGGCGGCGACCTGCGCTACGGCGCGGGCATCGGCGGGCGTTTCTACACCAATTTCGGCCCGATGCGGGTCGACATCGCCACCCCGCTCAACCCGCGCAAGGGCGACAGCCGCGTCGCGCTCTATATCTCGATCGGACAGGCTTTCTGA
PROTEIN sequence
Length: 681
VAFAVGRLYPVTTALLVLAPVSAHAQAAPDPQDNKPIVPDAEFEKALPPLSNDINAPLEAIQTPAPPPAQAAPVDPALEQPLAPITSFESTPLETAADVKDKAAPVIHYETVTRGLEEIGLAGQFKSLSSLRSGGGKATNATQIRARAREDEALAVRLMKSLGYYDGTAVSTIEQVPNQPGMLRAVVSATPGKLYHLGAINVVAPPTVPPGLIREQLPLKTGDAIDALRIQGAEANVSLALPQHGYPFAKVGQRDILLDETTLTGDYTLPVEPGVRGSFGALRTTGDKIFSIKHLNVFRRFKPGDLYDVRMTDDLRKALAATALFNSISVEPVATGQPGPDGTELVDLLVRQSKGPSHSLAGTAGYGTGEGFKLEGTWTSRNMFPPEGALILGAIAGTQQQGASATFRRANAGQRDRTFSIITSASHQTYDAFNAITGSLAVRWSYDSTPLWQKKITYFYGAELTGTNESVYDFARGERVRRTYGIAALPTQIMYDTSDDLLNPTRGYRLKLNLSPETSVQGAVDPYVRAMLEATFYYPVSSSLVIAGRARGGSIVGISRDDLAPSRRYYGGGGGSVRGFGYQRLGPLDPQGNPVGGRSLNEFSLEARYRFGNFGIVPFIDAGNAYESVLPKGGDLRYGAGIGGRFYTNFGPMRVDIATPLNPRKGDSRVALYISIGQAF*