ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2825_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1699..2607)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0M042_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 300.0
  • Bit_score: 506
  • Evalue 1.30e-140
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 300.0
  • Bit_score: 506
  • Evalue 3.60e-141
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGB75705.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 300.0
  • Bit_score: 506
  • Evalue 1.80e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGATAACCGTGCAGGCGAAATGCAGGTGTTTCTGCGCGGGGTGGAAGCGGGCAGCTTTTCGGAGGCCGCGCGGCTGTTGCGGATGACCCCGTCGACCGTCAGCAAATTGGTCTCGCGGATCGAGGCGCGGCTCGGGGTACGGCTCGTCGAGCGGTCGACGCGGCGGCTGTCGCTGACCGCGGAGGGGCAGGTCTATTACGAGCGCAGCCAGGCGCTGCTCCACGATCTCGACGATATCGAGCGCGAATTGTCGCATGGCGCGGCGACCACCGGCGGCACGGTGCGGGTCAATATCTCGGTCGCGCTGGGCACGCTCGGGCTCGAACCGTTGCTGCCCGGTTTCTGGCAGGACTATCCCAATATCGTCGTCGATCTGTCGCTGTCGGACGAGATCGTCGACCTCTATCTCGACCGCACCGATATCGCGTTCCGCGTCGGGCCGCTGCCGGATTCGGGGATGATCGCGCGGCGGCTCGGCACCGCGTTTCGCAAGATCGTCGCCGCGCCGGCCTATCTCGAGCGCCACGGCATGCCCCGCAGCGTCGACGATCTCGCGCAGCACAATTGCCTGGGGTTCAACTTCCGCCGCGCCGCGCCGGTATGGCCGATCCGCGAGAGCGGACGGATCGTCGATCGCGCGGTGAAGGGCGCGCTGCTCGCCAATAATGGCGAGACGGTACGGCATATGGCGCTCGCCGGGGTCGGGCTGGCGCGGATGGGGGATTATCATGTCCGCGCCGATCTCGCCGCGGGACGGCTGGTCGAGGTGCTCGCCGATGTGATCGAGCCCGACGAGGAGCAGATCCACGCGGTCTTCCTCGGCGGCACGCATATGCCGCAACGCATGCGCGCGTTCCTCGATTATGTCGCGCCGCGCCTCCAGCGTTACCTCAGCGCCGACGATTGA
PROTEIN sequence
Length: 303
MDNRAGEMQVFLRGVEAGSFSEAARLLRMTPSTVSKLVSRIEARLGVRLVERSTRRLSLTAEGQVYYERSQALLHDLDDIERELSHGAATTGGTVRVNISVALGTLGLEPLLPGFWQDYPNIVVDLSLSDEIVDLYLDRTDIAFRVGPLPDSGMIARRLGTAFRKIVAAPAYLERHGMPRSVDDLAQHNCLGFNFRRAAPVWPIRESGRIVDRAVKGALLANNGETVRHMALAGVGLARMGDYHVRADLAAGRLVEVLADVIEPDEEQIHAVFLGGTHMPQRMRAFLDYVAPRLQRYLSADD*