ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2512_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 4908..5825

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EE6 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 304.0
  • Bit_score: 469
  • Evalue 1.70e-129
Uncharacterized protein {ECO:0000313|EMBL:AHE54642.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 297.0
  • Bit_score: 505
  • Evalue 3.00e-140
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 304.0
  • Bit_score: 463
  • Evalue 4.60e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGGTATTTGCGAAGGACGGGTGGTTATCGTCACCGGGGCGGGCAACGGCCTCGGCCGGGCCTATGCTTTGGGGCTGGCGGCGGAAGGCGCGAAGGTCGTGGTCAACGATCTTGGCGTCGGCACGCACGGCGAGAGCGGCGAAACCAGGGGCGCGGCGGAGCGCGTCGTCGACGAGATCCGCGCCGCGGGCGGCGAGGCGGTGGCCAACACCGATGACGTCGCGGACTGGGATGCCGGCAAGCGCATCGTCCAGACCGCGCTCGACGCATTCGGCACGCTCCACGCGGTCGTCAACAACGCCGGCTTCGTGCGCGATCGCATGTTCGTTTCCTGCACCCCGGAGGAATGGGATGCGGTGACGCGGGTTCACCTGCGCGGGCATTTCTGCACCAGCCGCCACGCGGTCGATTTCTGGCGCGCGCGGCAGAAGGCGGGCGAGGCGATCGATGCGCGGATCATCAACACCTCGTCGGGCGCCGGCCTGCAGGGCAGCATCGGGCAGAGCGCTTATTCCGCCGCCAAGGCCGGGATCGCCGCGTTGACGCTGATCCAGGCCGCCGAGCTGGCGCGCTATGGCATCACCGCCAATGCGCTCGCGCCCAATGCGCGCACCCGCATGACGATGACGGCCTTCGCCGACACGATGACCTCGCAGCAGGACGCCGCGTTCGACCCTTATGCGCCGGAGAATACCGCGCCGCTCGTCGCGTGGCTGGCGAGCGAGCAGTCGCAGGGCGTGACCGGGCAGGTGTTCGAGCCGTTCGGCGGCACGATCCGCCTGTCGGAAGGCTGGACCGACGGCCCCACCTCCGCCGATGTCGGCCGCGCGCTGCGCGCCGATGAGGTGGGCGGCGTGGTCAGCGCGCTCGTCGCGCAGCGCAACCCGGCCAAGCCGGTTTACGGAACCGCGGCATGA
PROTEIN sequence
Length: 306
MGICEGRVVIVTGAGNGLGRAYALGLAAEGAKVVVNDLGVGTHGESGETRGAAERVVDEIRAAGGEAVANTDDVADWDAGKRIVQTALDAFGTLHAVVNNAGFVRDRMFVSCTPEEWDAVTRVHLRGHFCTSRHAVDFWRARQKAGEAIDARIINTSSGAGLQGSIGQSAYSAAKAGIAALTLIQAAELARYGITANALAPNARTRMTMTAFADTMTSQQDAAFDPYAPENTAPLVAWLASEQSQGVTGQVFEPFGGTIRLSEGWTDGPTSADVGRALRADEVGGVVSALVAQRNPAKPVYGTAA*