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SCN18_14_9_16_R4_B_scaffold_2331_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1..507)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 169.0
  • Bit_score: 233
  • Evalue 1.60e-58
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Sphingomonas RepID=UPI00028A3670 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 169.0
  • Bit_score: 228
  • Evalue 3.70e-57
1-deoxy-D-xylulose 5-phosphate reductoisomerase similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 169.0
  • Bit_score: 233
  • Evalue 3.30e-59

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAAAACAGTCACTATTCTTGGCGCGACCGGTTCGGTCGGCACTTCCACTCTCGATTTGATCGAGCGCTCGCCGGGGGCGTTCCGCGTCCGCGCGGTGACCGCCAACAGCGATGTCGCCAAATTGGCATCGGTCGCGATCCGCACCCGCGCCGAGCGCGCGGTGATCGCGGACGAGGCGCATCTTCCTGCCTTGCGTGATGCGCTCGCCGGGTCCGGCGTCGTCGCGGCGGGCGGCGCCGAGGCGGTGGTCGAGGCGGCCGGCGAGGGCGCCGACGTCACGGTCGCCGCGATCGTCGGCTGTGCCGGGCTCAAGCCGGTGATGGCGGCGATCCGCGCCGGCAGCACGATCGCGCTCGCCAACAAGGAAGCGCTGGTTTCCGCCGGCGACGTGATGAAGGCGGCGATCGCCGACCACGGCGCGACGCTGTTGCCGGTCGACAGCGAGCATAACGCTATTTTCCAATGCCTTGATGCGAAACTCTCGCACCGCATCCGACGTATCATC
PROTEIN sequence
Length: 169
MKTVTILGATGSVGTSTLDLIERSPGAFRVRAVTANSDVAKLASVAIRTRAERAVIADEAHLPALRDALAGSGVVAAGGAEAVVEAAGEGADVTVAAIVGCAGLKPVMAAIRAGSTIALANKEALVSAGDVMKAAIADHGATLLPVDSEHNAIFQCLDAKLSHRIRRII