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SCN18_14_9_16_R4_B_scaffold_2331_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2070..2627)

Top 3 Functional Annotations

Value Algorithm Source
ribosome recycling factor n=1 Tax=Sphingomonas elodea RepID=UPI0002630ABB similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 185.0
  • Bit_score: 332
  • Evalue 2.00e-88
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 185.0
  • Bit_score: 328
  • Evalue 4.00e-87
ribosome-recycling factor similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 324
  • Evalue 1.50e-86

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCGGCCTATGACAAGGCGGACCTGGAACGCCGGATGCACGGTGCGGTCGAATCGCTGAAGGGCGATCTCGGCGGCCTGCGGACCGGACGTGCCTCCACCTCGCTGCTCGATCCGGTGACGGTCGAGGTCTATGGCGCGCACATGCCGCTCAATCAGGTCGCGACCGTTTCCGCGCCCGAACCGCGGATGCTCTCGGTGCAGGTGTGGGACAAGTCGAACGTCGGCCCGGTCGAAAAGGCGATCCGCTCCGCCGGGCTCGGGCTCAACCCGATCAACGACGGCCAGACCTTGCGCCTGCCGATCCCCGATCTGACCGAGGAGCGCCGCAAGGAACTGGCCAAGCTCGCCGGTCAATATGCCGAAAAGGCCCGTATCGCCGCGCGCAACGTGCGCCGCGACGGGATGGACGCGCTCAAGACCGACGAGAAGAAGGGCGTGTTCGGCGAGGATGAGCGCAAGCGCCACGAAAACGAGGTGCAGAAGCTGACCGACAATACGATCGCCGACATCGATGCGGCGGCGGCGACGAAGGAAAAGGAAATCCTCGGTAAGTGA
PROTEIN sequence
Length: 186
MAAYDKADLERRMHGAVESLKGDLGGLRTGRASTSLLDPVTVEVYGAHMPLNQVATVSAPEPRMLSVQVWDKSNVGPVEKAIRSAGLGLNPINDGQTLRLPIPDLTEERRKELAKLAGQYAEKARIAARNVRRDGMDALKTDEKKGVFGEDERKRHENEVQKLTDNTIADIDAAAATKEKEILGK*