ggKbase home page

SCN18_14_9_16_R4_B_scaffold_4260_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1154..2431)

Top 3 Functional Annotations

Value Algorithm Source
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 424.0
  • Bit_score: 625
  • Evalue 2.80e-176
serine--tRNA ligase (EC:6.1.1.11) similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 425.0
  • Bit_score: 624
  • Evalue 2.20e-176
seryl-tRNA synthetase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4E6D9 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 425.0
  • Bit_score: 678
  • Evalue 3.40e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGCACGATATCCGCCTGATCCGAGAGAATCCGTCCGATTTCGACGCCGCGATGGCGAAGCGCGGCAAGGGGGCGGAAAGCGCCATCATCCTCGACCTCGATCGCCGCCGGCGCGAGGCGATCACCGAATTGCAGGTCGGGCAGGCGCGCCGCAACGAAGCCTCGAAGGCGATCGGCGCGGCCAAGGCGGCGAAGGACGAGGCCACCGCCAGCGCGCTGATGGCCGAGGTGGCCACGCTCAAGCAGCGGCTGCCCGAGCTGGAAGCGGAGGAAGCGCGGCTCGGCACCGAGCTGGATGATCTGCTCGCCGCGCTGCCCAATATTCCGCTGCCCGACGTGCCGGCGGGCGCCGACGAGAATGAAAACCAGCTCGTCCACGAGCGCGGCACGCGGCGCGATTTCACCTTCGAGGTGAAGGAGCATGATGCGATCGGCCCCGCGCTGGGGCTCGATTTCGAGACCGGCGCGCTGATCGCCGGCGCGCGCTTCACCTTGGTGCGTGGGCAGATGGCGAAGCTCAACCGCGCGCTCGGCCAGTTCGGGCTCGACACGCTGACCCGCGCGCACGGCTATGAGGAAGTCGCCCCGCCGCTGCTCGTGCGCAGCGAGTCGATGTTCGGCACCGGGCAGCTCCCCAAATTCGCCGAGGATCTGTTCGAGACCATCGATGGCCGCTGGCTGATCCCGACCGCCGAGGTGAGCCTGACCAATATCGTCCGCGAGCGCATCCTCGCCGCCGACGAGCTGCCGCTGCGCTTCACCGCGCTCACCCCCTGCTTCCGCTCCGAGGCGGGCGCGGCGGGGCGCGATACGCGCGGCTTCATCCGCCAGCATCAGTTCGAAAAGGCCGAGATGGTCTCGATCGTCCCGCCCGAACAGTCCGAGGCGGAGCATGAGCGGATGACCGCCGCGGCGGAGGATGTGCTGACCCGGCTCGGGCTGCCGTTCCGCCGGATGAAATTGTGCACCGGCGACATGGGGTTCACCGCCGCGCGGACCTATGACCTCGAAGTGTGGCTGCCCGGCCAACAGCGCTATCGCGAGATTTCCTCCTGCTCGACCTGCACCGATTTCCAGGCCCGGCGGATGAACGCGCGCTACCGGCCGGAGGGCGAGAAGGCGACGCGCTTCGTCCATACGCTCAATGGCTCCGGGCTGGTGGTCGGACGCATGATCGTCGCGATCCTCGAAAATTATCAGCAGGAAGACGGGTCGGTGTGGGTGCCGGAGGTGCTCCAGCCCTATCTCGGCGGCCTCAACCGGCTGGAGCCGCGCTGA
PROTEIN sequence
Length: 426
MHDIRLIRENPSDFDAAMAKRGKGAESAIILDLDRRRREAITELQVGQARRNEASKAIGAAKAAKDEATASALMAEVATLKQRLPELEAEEARLGTELDDLLAALPNIPLPDVPAGADENENQLVHERGTRRDFTFEVKEHDAIGPALGLDFETGALIAGARFTLVRGQMAKLNRALGQFGLDTLTRAHGYEEVAPPLLVRSESMFGTGQLPKFAEDLFETIDGRWLIPTAEVSLTNIVRERILAADELPLRFTALTPCFRSEAGAAGRDTRGFIRQHQFEKAEMVSIVPPEQSEAEHERMTAAAEDVLTRLGLPFRRMKLCTGDMGFTAARTYDLEVWLPGQQRYREISSCSTCTDFQARRMNARYRPEGEKATRFVHTLNGSGLVVGRMIVAILENYQQEDGSVWVPEVLQPYLGGLNRLEPR*