ggKbase home page

SCN18_14_9_16_R4_B_scaffold_4274_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(3388..4089)

Top 3 Functional Annotations

Value Algorithm Source
sulfonate ABC transporter permease n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002889B40 similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 233.0
  • Bit_score: 416
  • Evalue 1.70e-113
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 231.0
  • Bit_score: 379
  • Evalue 5.10e-103
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ66641.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 231.0
  • Bit_score: 379
  • Evalue 2.50e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
CTCGGCTGGGCGGTGTGGCTGATTGCCGGCTATGTCGCGCACAATCTTTCCGCGGGGGACGTGCTGCGCGCCTTCGGGCTCGGCATGATCACGATGTTCCGCGTGCTCGTGCTGATCGCGCTCGCCAGCCTGATCTGGGTGCCGATCGGGGTGTGGATCGGGCTGCGCCCGCGCTGGGCCGAGCGGCTCCAGCCGGTCGCGCAATTCCTCGCCGCCTTTCCCGCCAACGTGCTGTTCCCCTTCGCGGTGATCGCGATCGTCCACTGGCACCTCAGCCCCGACATCTGGCTGTCGCCGCTGATGGTGCTCGGCACGCAATGGTATATCCTGTTCAACGTCATCGCCGGGGCGAGCGCGATCCCCAACGATCTGCGCGAGGCCGCCGGCATGTTCGGCGTCAAGCGCTGGCAATGGTGGCGCAGCCTCGCGATCCCCGGCATCTTCCCTTATTATGTCACCGGCGCGCTGACCGCTTCGGGCGGATCGTGGAACGCCAGCATCGTCGCCGAGCTGGTGAGCTGGGGCAATCAGAAGCTCACCGCGACCGGGCTCGGCGCCTATATCGCGCAGGCGACCGCCGACGGCGATTTCCCGCGCGTGACGCTCGGCATCGCGGTGATGTCGATCTTCGTCATCGGGTTCAACCGGCTGCTGTGGCGGCCGCTCTATGCCTATGCCGACCGCCGTCTGCGGCTCGGCTGA
PROTEIN sequence
Length: 234
LGWAVWLIAGYVAHNLSAGDVLRAFGLGMITMFRVLVLIALASLIWVPIGVWIGLRPRWAERLQPVAQFLAAFPANVLFPFAVIAIVHWHLSPDIWLSPLMVLGTQWYILFNVIAGASAIPNDLREAAGMFGVKRWQWWRSLAIPGIFPYYVTGALTASGGSWNASIVAELVSWGNQKLTATGLGAYIAQATADGDFPRVTLGIAVMSIFVIGFNRLLWRPLYAYADRRLRLG*