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SCN18_14_9_16_R4_B_scaffold_4305_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2156..2608)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B318E4 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 146.0
  • Bit_score: 164
  • Evalue 7.60e-38
Transcriptional regulator {ECO:0000313|EMBL:EJL33477.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 147.0
  • Bit_score: 146
  • Evalue 3.00e-32
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 132.0
  • Bit_score: 108
  • Evalue 1.40e-21

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGCATATGCATCATGAAGACGACTCGCTGACCGCGCTGCCCTGTATCTGCACCGCGCTGCGCAAAGCCTCGCGCGCGGTGACCCGCGCCTATGACGAGGTGATGGAGGGCGCCGGGATGTCGGTGGCGCAATTCGCGGTCCTGCGGAATCTCGCGCGGCACGGCGCCTTGCCGTTGAGCCGGCTCGCCGAACTGCTGGTGATGGAACGGACCACGCTCTATCGCGCGCTCGGCCCGATCGAACGGCACGGCTGGGTGACGATCGCTGAAGGGGAAGGGCGCGCCAAGATCGCGACGCTCAGCCCCGCCGGGGAGCAGGCGATCGCCGATGCCACTGCCGGCTGGGCCAGGGTGCAGACCGCGATGCTGCAACAGATCGGCGCCGACGACTGGCGCGAGCTTGAGGCGGCGCTGGGGCGGATCGTCGCCGCGACGCGGGAATGCGGCGCATGA
PROTEIN sequence
Length: 151
MHMHHEDDSLTALPCICTALRKASRAVTRAYDEVMEGAGMSVAQFAVLRNLARHGALPLSRLAELLVMERTTLYRALGPIERHGWVTIAEGEGRAKIATLSPAGEQAIADATAGWARVQTAMLQQIGADDWRELEAALGRIVAATRECGA*