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SCN18_14_9_16_R4_B_scaffold_4394_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(334..1257)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV95_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 292.0
  • Bit_score: 334
  • Evalue 8.70e-89
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 292.0
  • Bit_score: 341
  • Evalue 2.00e-91
LysR family transcriptional regulator {ECO:0000313|EMBL:AJA07969.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 292.0
  • Bit_score: 341
  • Evalue 1.00e-90

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Taxonomy

Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGTTGCCGACTCATTCTGCAAAAGTGCAGAATAGCGGCATGATGTCGGACTGGGACGACGTTCGCCATTTCCTTGCCGTTGCGGAGACGGGCAGCACGCTCGCCGCCGGCCGCGCCTTGCGCGTCAGCCAGACCACCGCCGCGCGCCGCGTCGCCGCGCTGGAGGAGGCGCTGGGGGTCATCCTGTTCGACCGGCGGCAGGCGGGCTATCTGCTCACCCCGGCGGGCGAGGCGTTGCTGACCCACGCGCGGAGCGCGCAGGATGCGCTGCGCCGGCTGACCGACGAGGCTTCACTGATCGGCCGTGCGGCGGACGGGGTGGTGCGGATCACCTTGTCGCCGATCTTCGCCTTCACCTTCATGATGCCGATCGTCGGCGATCTGCGCGCGGCGCATCCCGGAATTCGCATCGAGATCGACACCACCGAGGAGGTGCGCGATCTCGTCGGCGGCGAGGCGGATGTCGCGATGCGCGTCAGCAAGGAACGCAGCGGCGCCGGGCTGGTGTGGCGGCGGCTGACCGACGATCCGTGGACGGTCTATTGCAGCCGCGCCTATGCCGAGCGCTACGGCGCGCCGCATCACATGTCCGAACTGGCCAACCACCCCTTCATCGGCGGCGGCGAGCCGGGGGTATGGTCGCATTATCAGGCGTGGCTCGCGGCGAGCGGGCTGGAGGACAAGGTGATCATGCACCACAATTCCTCGACCGGGCTGCTCGCGGCGGTGCGCGCGGGCACCGGGCTGGCCGCGCTGCCGTGCCTCGCGGCGGATACCGACCCCGATCTGATCCGCTGCGTCCCGCCGCTCAAGGAAGTAATAACCCATTTGTGGCTGGTCTATCCCGGGCGGCTCCGCCACGAACCGCGTATCCGCGCGGTGCTCGATTTCCTGATCGCGCGGGTACCGCGGTTTACGGGGTGA
PROTEIN sequence
Length: 308
MLPTHSAKVQNSGMMSDWDDVRHFLAVAETGSTLAAGRALRVSQTTAARRVAALEEALGVILFDRRQAGYLLTPAGEALLTHARSAQDALRRLTDEASLIGRAADGVVRITLSPIFAFTFMMPIVGDLRAAHPGIRIEIDTTEEVRDLVGGEADVAMRVSKERSGAGLVWRRLTDDPWTVYCSRAYAERYGAPHHMSELANHPFIGGGEPGVWSHYQAWLAASGLEDKVIMHHNSSTGLLAAVRAGTGLAALPCLAADTDPDLIRCVPPLKEVITHLWLVYPGRLRHEPRIRAVLDFLIARVPRFTG*