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SCN18_14_9_16_R4_B_scaffold_3589_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3..302

Top 3 Functional Annotations

Value Algorithm Source
excinuclease ABC subunit C n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6CBF8 similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 99.0
  • Bit_score: 183
  • Evalue 1.00e-43
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 99.0
  • Bit_score: 180
  • Evalue 7.30e-43
excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 1.20e-42

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTGGACGGCCGCGAGCTGACCTTGCCGGTCAACGCCCCGGTGCTCTTCTATCTCCAGCGGCTGCGCGACGAGGCGCACCGCTTCGCGATCGGCGCGCACCGCCAGAAACGCGCCAAGGCGATCGGCGCCAGCCCGCTCGACGAAGTGCCCGGGATCGGCCCGGCGCGGAAGAAGGCGCTGCTGATGCATTTCGGCACCGCGCGCGCGGTGCGCGACGCCAGCCTTGCCGATCTGCAGAAGGCACCGGGAGTCTCCGCCACGGTCGCGCAACAAGTCTATGATTTTTATCACGCAAAATAG
PROTEIN sequence
Length: 100
VDGRELTLPVNAPVLFYLQRLRDEAHRFAIGAHRQKRAKAIGASPLDEVPGIGPARKKALLMHFGTARAVRDASLADLQKAPGVSATVAQQVYDFYHAK*