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SCN18_14_9_16_R4_B_scaffold_2873_7

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(5066..6349)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 429.0
  • Bit_score: 681
  • Evalue 5.70e-193
2-isopropylmalate synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3F7F1 similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 429.0
  • Bit_score: 692
  • Evalue 1.80e-196
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 429.0
  • Bit_score: 677
  • Evalue 2.20e-192

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
GTGATCCACATGTACACCGCGACGGCGCCGACCTGGCGCGACCTGGTGCTCGGTCACGCGTCGGCCGAGCTGAAGCACCTCGTCCTCAGCGGGGGGCGCGATGTGCTGGAGTTCGCCGGCGACATGCCGAACGTGCGGTTCGAGTTCTCACCCGAGGTGTTCAACCTCACCGAACCGGACTACGTGCTCGACATCTGCGACTCCATGACCGAACTGTGGGATGCGCGACCAGAGCGCCCGGTGATCCTCAACCTGCCCGCAACGGTCGAATGCGCGACGCCCAACGTCTATGCCGATCAGATCGAATGGTTCGGCCGCAACATCCCCAATCGCGACAGCGTGGTGATCTCGCTTCACACGCATAACGATCGCGGCACCGGGGTCGCGGCGGCGGAACTGGGGCTGATGGCCGGCGCCGATCGCGTAGAGGGCTGCCTGCTGGGCAATGGCGAGCGTACCGGCAATTGCGATCTCGTCACCGTCGCGCTCAACATGTACACACAGGGCGTCGATCCGCAGCTCGACCTGTCGGACATCGACGAGGTGGTGAAAACGGTGGAATATGCCACCAACATCACCGTCCACCCGCGCACGCCCTATGCCGGCGATCTGGTATTCACCGCGTTCAGCGGCAGCCACCAGGATGCGATCAAAAAGGGCTTCGCCGCGCAGGCCGCGCGCAACGACGAACATTGGGAAGTCCCCTATCTGCCGATCGATCCGGCCGATCTCGGCCGCAGCTATGAGGCGGTGATCCGGGTCAATTCGCAATCGGGCAAAGGCGGCGTCGCCTGGGTGCTGGAGCAGGACAAGGGGCTCAAACTGCCCAAGCGCATGCAGGCCGATTTCAGCCGCATCGTCCAGGCGCTGGCCGACGAAACGAGCCGCGAATTGAATGCCGCCGATATCTGGGGCGCGTTCGAGCGCACCTATCTGCCGGCGGCGAGCGACCGTTTCGTGCTGCGCGATTATGAGGAAACCGGCGCCTCGGGCGACCGGCGCTTCGTCGGACGCGTGTCGATCGACGGCGAGGAGCGCTCGCTCTCCGGGCGCGGCAATGGCCTGATCTCCGGGGTGATCGCGGCATTGTCCGAAACCACCGGGCCGGCGCTGGAAGTGGTCGATTACAGCGAACATGCGATCGGCCACGGCGCCGATGCACAGGCGGCGACCTATCTCGAATGCCGCGCCGCCGACGGGCGGACCGTGTGGGGCGTCGGGATCGATTCGGATATCGCCACCGCCAGCGTCCGCGCGGTGCTGAGCGCCGCGAACCGGGCGTAA
PROTEIN sequence
Length: 428
VIHMYTATAPTWRDLVLGHASAELKHLVLSGGRDVLEFAGDMPNVRFEFSPEVFNLTEPDYVLDICDSMTELWDARPERPVILNLPATVECATPNVYADQIEWFGRNIPNRDSVVISLHTHNDRGTGVAAAELGLMAGADRVEGCLLGNGERTGNCDLVTVALNMYTQGVDPQLDLSDIDEVVKTVEYATNITVHPRTPYAGDLVFTAFSGSHQDAIKKGFAAQAARNDEHWEVPYLPIDPADLGRSYEAVIRVNSQSGKGGVAWVLEQDKGLKLPKRMQADFSRIVQALADETSRELNAADIWGAFERTYLPAASDRFVLRDYEETGASGDRRFVGRVSIDGEERSLSGRGNGLISGVIAALSETTGPALEVVDYSEHAIGHGADAQAATYLECRAADGRTVWGVGIDSDIATASVRAVLSAANRA*