ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2260_7

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 7477..8046

Top 3 Functional Annotations

Value Algorithm Source
Response regulator n=1 Tax=Sphingomonas sp. S17 RepID=F3WTT9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 190.0
  • Bit_score: 373
  • Evalue 8.00e-101
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13375.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 190.0
  • Bit_score: 373
  • Evalue 1.10e-100
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 190.0
  • Bit_score: 369
  • Evalue 5.60e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGCGCGTCCTGATCGTCGAAGACGAGCCGAATCTCGGCCAGCAGCTCAAGAGCACGCTGGAAGGCGCGGGCTATGCCATCGATCTCGCCACCGACGGCGAGGAAGGGCATTTCCTCGGCTCGACCGAAAGCTATGACGCGATCGTGCTCGATCTCGGCCTGCCGGAGATCGACGGGCTGACCGTGCTCGATCGCTGGCGCAAGGAAGGCAAGACCACGCCGGTGCTGGTGCTCACCGCGCGCGACAGCTGGTCGGACAAGGTCGCCGGGCTCGATGCCGGCGCCGACGATTATGTCGCCAAGCCGTTCCAGACCGAGGAACTGATCGCCCGGCTGCGCGCGCTGATCCGCCGCGCTTCGGGCAATGCCTCGTCGGAGCTGACCGCGGGCGATGTCCGGCTCGATACGCGCTCGGGCAAGGTGACCCGCGCCGGCGAACCGGTGAAGCTGACCGCGCAGGAATATAAGCTGTTGAGCTACCTGCTCCACCACAAGGGGAAGGTGGTCAGCCGCACCGAACTGATCGAGCATATCTACGATCAGGATTTCGACCGCGATTCGAACACGATC
PROTEIN sequence
Length: 190
MRVLIVEDEPNLGQQLKSTLEGAGYAIDLATDGEEGHFLGSTESYDAIVLDLGLPEIDGLTVLDRWRKEGKTTPVLVLTARDSWSDKVAGLDAGADDYVAKPFQTEELIARLRALIRRASGNASSELTAGDVRLDTRSGKVTRAGEPVKLTAQEYKLLSYLLHHKGKVVSRTELIEHIYDQDFDRDSNTI