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SCN18_14_9_16_R4_B_scaffold_4701_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1424..2905)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 490.0
  • Bit_score: 616
  • Evalue 2.60e-173
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35) similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 491.0
  • Bit_score: 558
  • Evalue 1.30e-156
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7B1FE similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 492.0
  • Bit_score: 794
  • Evalue 4.90e-227

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
GTGGCGGCCACGGTGCGCAAGGCCGGGCTGGTCGGCGGCGGGGTGATCGGTGCCGGCTGGGCGGCGCGGCTGCTGCTCAACGGCATCGACGTCGCGATCTTCGATCCCGATCCCGAAATCGGCCGCAAGGTGGAGACGGTGCTGGCCGGCGCGCGGCGCGCGTGGCAGCGGCTGGTCCCCACCGGGTTGCCGGCCGAGGGCAGGCTGCGGCTCGCCTCCTCGGTCGAGGATGCGGTTTCCGAAGCCGATTTCGTCCAGGAAAGCCTGCCCGAGCGTGAGGATCTCAAGATCGACATCCTCGGCCGCATCGATCGCGCGACGCGCCCCGAGGTGGTGATCGGCTCGTCGACGTCGGGGTTGCTGCCGACGCGGCTGCAATCGGGGATGACGCATCCCGAGCGGCTGGTGGTCGGCCATCCGTTCAACCCGGTCTACCTGCTCCCGCTGGTCGAGATCTGCGGCGGCGCGGCGACCTCCGATGCGACCAAGCAATGGGCGGCGGATTTCTACACCTCGCTCGGCATGCACCCGCTGCATGTCCGCAAGGAGATCGACGGCTTTATCGCCGATCGCCTGCTCGAAGCTTTGTGGCGCGAGGCCTTATGGCTGGTCAATGACGGCATCGCCACCACCGAGGAGATCGACGACGCGATCCGCTATGGCGCGGGGCTGCGCTGGTCGTTCATGGGCACCTTCCTGATCTATCGCGTCGCCGGCGGCGAAGCGGGGATGCGGCATTTCCTCGCGCAATTCGGCCCGGCGCTGAAATTGCCGTGGACCAAGCTGGAAGCGCCCGAGCTGACCGATGCACTGGTCGATCGCGTCGCCGAACAATCCGATGATCAGGCCGGCGGCACCTCGATCCGCGAATTGGAGCGGGTGCGCGACGATGCGCTGATCGCGGTGCTTTCGGGGCTGCGCGGCGAGGATTATGGCGCGGGCAAGACGCTCGCCGATTACGCTCGTGCGCTGATGGCGAAGCTGCCGGCAACGGTGGATCAGGTGGACGAGTCGCAGCCGCTTGCGCTGCACGAGGCGCCGGTGGTGGCCGAGTGGATCGATTATAACGGCCATATGACCGAGCATCGCTATCTGCAGGTGTTCGGCGATACGACCGATGCGCTGCTACGCTATATATCGGTCGATGCCGCTTATCTGGCGAACAATGGCAGCTGGTATACCGTCGAGACGCATATCCGGCATCTCGGCGAGACCAAGGCCGGCGACCGGCTGACCGCGACGACCCAGATCCTCGGCGCGGACGAGAAACGTCTTCACGTCTTCCACAGCCTGTCGCGCGCCAGCGACGGCGCCTGCGTCGCGACTGCCGAACAGATGCTGCTCCACGTCGACGCCAAAACCGGGCGTGGCGGCCCTGCGACCGGGACGCCCGCCGCACGGGTTGCGGCGCTGGCCACGGCGCAGGCCGGGCTTGCCCCGCCCGATGGCGCCGGACGACGGATTTCAATGCCGGGAAAATAA
PROTEIN sequence
Length: 494
VAATVRKAGLVGGGVIGAGWAARLLLNGIDVAIFDPDPEIGRKVETVLAGARRAWQRLVPTGLPAEGRLRLASSVEDAVSEADFVQESLPEREDLKIDILGRIDRATRPEVVIGSSTSGLLPTRLQSGMTHPERLVVGHPFNPVYLLPLVEICGGAATSDATKQWAADFYTSLGMHPLHVRKEIDGFIADRLLEALWREALWLVNDGIATTEEIDDAIRYGAGLRWSFMGTFLIYRVAGGEAGMRHFLAQFGPALKLPWTKLEAPELTDALVDRVAEQSDDQAGGTSIRELERVRDDALIAVLSGLRGEDYGAGKTLADYARALMAKLPATVDQVDESQPLALHEAPVVAEWIDYNGHMTEHRYLQVFGDTTDALLRYISVDAAYLANNGSWYTVETHIRHLGETKAGDRLTATTQILGADEKRLHVFHSLSRASDGACVATAEQMLLHVDAKTGRGGPATGTPAARVAALATAQAGLAPPDGAGRRISMPGK*