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SCN18_14_9_16_R4_B_scaffold_3909_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2931..4361

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 476.0
  • Bit_score: 837
  • Evalue 9.00e-240
isopropylmalate isomerase (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 476.0
  • Bit_score: 836
  • Evalue 3.10e-240
isopropylmalate isomerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B34DAB similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 476.0
  • Bit_score: 839
  • Evalue 1.70e-240

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGGCCACACGCCCCCTCACGCTCTACGAAAAGGTCTGGAACGCGCACGTCGTCGAACGGCGCGACGACGGGACCTGCCTGATCTATATCGATCGCCACCTCGTTCATGAGGTCACCAGCCCGCAGGCGTTCGAGGGGCTTCGCGCCGCCGGCCGCCGCGTGCGCCGGCCCGATCTGACGCTTGCCGTGCCCGATCACAATCTGCCGACCACCGCGCGCGTCGACGACACCGGGCGCGAGCTGCCGATCGCCGACCCGGAAAGCGCGACCCAGCTCGCTGCTTTGCGCCACAATGTCGCGGAATTCGGCGTGCCCTATATCGACGCGCTCGCGCCGGCGCAGGGCATCGTCCATGTCGTCGGCCCGGAGCAGGGCTTCACCTTGCCCGGCACGACGATCGTGTGCGGCGACAGCCACACCTCGGCGCATGGCGCGCTCGGTGCCTTGGGCTTCGGCATCGGCACCAGCGAGGTCGAGCATGTGCTCGCGACGCAGACCCTGCTACTCTCGCAATCCAGGACGATGGAAGTGCGCGTCGACGGCACGCTTGGCTTCGGGGTCAGCCCGAAGGACGTGATCCTCGCGATCATCGGGCGGATCGGCGCGGCGGGCGGCACCGGGCATGTCATCGAATTTACCGGCGACGTGATCCGCGCGATGTCGCTCGAAGGGCGGCTGACCGTTGCCAATATGTCGATCGAGGGCGGCGCGCGTGCCGGGATGATCGCGCCCGACGATACCACCTTCGCCTATCTCAAGGGCCGTGCGATGGCGCCGGCGGGCGCGGATTGGGACAAAGCGGTCGATTGGTGGCGCTCGCTCGCCACCGACGCCGGGGCGGTGTATGACAAGCGCGTCGTGCTCGCCGCGAGCGATATCGCGCCGGGCCTCACCTGGGGCACCAGCCCGGAGGATGTCGTGCCGATCACCGGCGTCGTTCCCGATCCCGACAGCTTCGCCGATCCGTCCAAGCAGGCGGCGGCGCGCAAGTCGCTCGATTATATGGGGCTCGCGCCGGGGACGCGGATGCAGGACGTTGCGATCCAGCATGTCTTCATCGGCAGCTGCACCAACAGCCGGATCGAGGATCTGCGCGCGGCCGCCGCGGTGGCCGACGGACGGCATGTCGCCGACGGGGTGCGCGCGATGGTCGTGCCCGGCTCGGGGCTGGTCAAGCAACAGGCCGAGGCCGAAGGTCTCGACCGGATCTTTACTGCGGCGGGGTTCGAATGGCGCGAGCCGGGTTGCTCGATGTGCCTTGCGATGAACCCGGACAAGGTGCCGGCCGGCGAGCGTTGCGCGTCGACCAGCAACCGCAATTTCGTCGGGCGGCAGGGGCCGGGTGCGCGCACCCACCTCGTCTCCCCGGCGATGGCGGCGGCGGCAGCGGTCAAGGGCCGACTGACCGACGTGCGCGAGTTGATTGGTTGA
PROTEIN sequence
Length: 477
MATRPLTLYEKVWNAHVVERRDDGTCLIYIDRHLVHEVTSPQAFEGLRAAGRRVRRPDLTLAVPDHNLPTTARVDDTGRELPIADPESATQLAALRHNVAEFGVPYIDALAPAQGIVHVVGPEQGFTLPGTTIVCGDSHTSAHGALGALGFGIGTSEVEHVLATQTLLLSQSRTMEVRVDGTLGFGVSPKDVILAIIGRIGAAGGTGHVIEFTGDVIRAMSLEGRLTVANMSIEGGARAGMIAPDDTTFAYLKGRAMAPAGADWDKAVDWWRSLATDAGAVYDKRVVLAASDIAPGLTWGTSPEDVVPITGVVPDPDSFADPSKQAAARKSLDYMGLAPGTRMQDVAIQHVFIGSCTNSRIEDLRAAAAVADGRHVADGVRAMVVPGSGLVKQQAEAEGLDRIFTAAGFEWREPGCSMCLAMNPDKVPAGERCASTSNRNFVGRQGPGARTHLVSPAMAAAAAVKGRLTDVRELIG*