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SCN18_14_9_16_R4_B_scaffold_3415_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(4304..5002)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZDJ7_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 231.0
  • Bit_score: 255
  • Evalue 3.00e-65
Uncharacterized protein {ECO:0000313|EMBL:AHE56765.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 230.0
  • Bit_score: 273
  • Evalue 2.50e-70
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 234.0
  • Bit_score: 255
  • Evalue 1.10e-65

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGAAGTTAGAAAAAGTGACTAAACGAAGCGAGGCAACGACGAAACGCTGGTATGACGACGCCTGCGGCACCGCGCTGGCGATGGAGCTGGTCGGCGAGCGCTGGTCGCTGCTGATCGTGCGCGAGCTGATGTTCGGCCCGCGCCGTTTCGGGGAATTGAAAGCCTCGCTCACCGGGATCAGCGCGAACGTGCTGACCCAGCGGCTCGAGGGGCTGGAGCGCGCGCATATCCTGAAGCGCCGCAAGCTGCCGCCGCCGGCGAACGTGCAGGTCTATGAGCTGACGCGTTGGGGCTATGAAGCGGAGGAGGCGATCAAGGTGCTCGGCGCCTGGGCGGCGCGGTCGCCCGATCACGATCCGACCCTGCCGCTGTCCTCGGCCTCGATGATGCTGTCGCTGCGCACGATGATCGATCGCGAAAAGGCGCGCGCGCTCCCGCCGATGACGATCGGTTTCACCTTCGGCCCCGAATCCTTCATCGGCCGGCTGGCGGGCGGCGAACTGCCGATCGTGCGCGGCGAGGGCGCGGCGGAGGTGCATTTCGCGACCAATGCGCGGTTCATGGCCAATATCGTCTATGGCAAATGGCCGATCGAGGAAGCCGAGGCGGAAGGCGCGCTGGTGTTCACCGGGGATCGCGCCAAGGCGCGCGCGTTTATCGATCTGTTCGCGCTTCCGCCGAAGGCAGAGGTTGAATAA
PROTEIN sequence
Length: 233
MKLEKVTKRSEATTKRWYDDACGTALAMELVGERWSLLIVRELMFGPRRFGELKASLTGISANVLTQRLEGLERAHILKRRKLPPPANVQVYELTRWGYEAEEAIKVLGAWAARSPDHDPTLPLSSASMMLSLRTMIDREKARALPPMTIGFTFGPESFIGRLAGGELPIVRGEGAAEVHFATNARFMANIVYGKWPIEEAEAEGALVFTGDRAKARAFIDLFALPPKAEVE*