ggKbase home page

SCN18_14_9_16_R4_B_scaffold_7793_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(953..1522)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3E2 similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 194.0
  • Bit_score: 209
  • Evalue 2.60e-51
Conserved Putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 186.0
  • Bit_score: 140
  • Evalue 3.20e-31
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 185.0
  • Bit_score: 157
  • Evalue 1.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGACGCCATTGGCCCGCTATCTCGTCCTGGGTGTCGTGGGCGTGGTGGCGGGGCTGGGCAGCGCGATCTACACCGTGCGCGCCGGTGCGCTCGGCTCCAACGTGCAGATTGGCGCGTGGACGACGGGGCTGGATTTCGCCAGCGGCGACCAGAGCGCGCGGACCCGCGCGGTGGTCGCGCTGCGCGGGCTGCTGGCGTTGCCGGCGCGCGAGGCGCGTTATTATACCGCGAGCGTCGACGATGCCGGGCGGCCGCTCAACGGGCGGTGCAGCTATCGTATCACCGGCGGGCAATTGCCGGGGCGCTGGTGGAGCCTCACTCTGTACGACGGCGCAGGCTATCTCGCCGGCGGAGGGCCTTATTCGGTCGAGAGCGCCGGCATTCCGGCGGAGAATCAGGCGCGCTGGACGGTGCTGGTCTCGCCGGTGCGCCAGCCGGGGCTGTGGTTGCCGACCGCCGGGCTCAAGCATTTCGAGCTGACCTTGCGCACCTATCTTCCGCCCGACGAGGGCCGGAGCAACCCGGCGCGTGATCAATTGCCCAGCATCCGGCAGGAGGCATGCGTATGA
PROTEIN sequence
Length: 190
MTPLARYLVLGVVGVVAGLGSAIYTVRAGALGSNVQIGAWTTGLDFASGDQSARTRAVVALRGLLALPAREARYYTASVDDAGRPLNGRCSYRITGGQLPGRWWSLTLYDGAGYLAGGGPYSVESAGIPAENQARWTVLVSPVRQPGLWLPTAGLKHFELTLRTYLPPDEGRSNPARDQLPSIRQEACV*