ggKbase home page

SCN18_14_9_16_R4_B_scaffold_5479_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1141..1329)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4BED8 similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 59.0
  • Bit_score: 85
  • Evalue 1.40e-14
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29674.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 59.0
  • Bit_score: 73
  • Evalue 1.00e-10
membrane protein similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 57.0
  • Bit_score: 70
  • Evalue 1.00e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
GTGAACAATGCGCTGACCGGGATCGCGCAGGCGGCGCCGGCCATTGGCATGATCGCCGCCTTCGCCTGCCTGATCGGCGGGCTCTATCTGGTGAGCAGCGGCAAGGACCGGCGCAAGGGCGTGCTGCTGCTGATCATGACCGCGGTGCTGGTCGGCAATATCCTGATCTGGACCTTGCCCACCGCTTGA
PROTEIN sequence
Length: 63
VNNALTGIAQAAPAIGMIAAFACLIGGLYLVSSGKDRRKGVLLLIMTAVLVGNILIWTLPTA*