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SCN18_14_9_16_R4_B_scaffold_5143_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3..368

Top 3 Functional Annotations

Value Algorithm Source
S4 domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WY16_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 93.0
  • Bit_score: 131
  • Evalue 5.80e-28
Putative RNA-binding protein S4 {ECO:0000313|EMBL:GAM01023.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 92.0
  • Bit_score: 132
  • Evalue 2.80e-28
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 94.0
  • Bit_score: 120
  • Evalue 2.90e-25

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
AGCCGGCCCCGCCGCCGCGCGACAATGCCTTTGCCGCCGCCTTCGCCGGGCTGCGCCGTGGCTGAAGCACCGTCGCCCGGCGCGATGCGGCTCGATCGCTTCTTGTGGTTCGCGCGGATCGTCAAGACGCGGCTGCTGGCGCAGGAAATGGCCGGCGACGGGCATTTGCGGATCGACGGCCGCGCGGTCGATCGCGCCGCCGCCGCGGTGCGCGTCGGCAATATCCTGACCTTCGCGCACCACGGCCGCGTCCGCGCGCTGCGCGTCGAAAAGCTCCCCGCGCGGCGCGGCCCGCCAGCCGAGGGGCGCGCCTGCTATCAGGAGCTGATTACTGATAACAACTCGCAGCAAGCCGGGAACGATTGA
PROTEIN sequence
Length: 122
SRPRRRATMPLPPPSPGCAVAEAPSPGAMRLDRFLWFARIVKTRLLAQEMAGDGHLRIDGRAVDRAAAAVRVGNILTFAHHGRVRALRVEKLPARRGPPAEGRACYQELITDNNSQQAGND*