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SCN18_14_9_16_R4_B_scaffold_5143_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1001..1534

Top 3 Functional Annotations

Value Algorithm Source
CarD family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B39CC0 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 177.0
  • Bit_score: 332
  • Evalue 2.50e-88
Putative CarD family transcriptional regulator {ECO:0000313|EMBL:GAM01021.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 177.0
  • Bit_score: 324
  • Evalue 5.60e-86
CarD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 177.0
  • Bit_score: 317
  • Evalue 1.80e-84

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGCTGCCAAGGCTCTGCATTTCGATGTCGGTGATTATGTCGTGTACCCCAAGCACGGGGTCGGCAGGGTCATCGAACTGCAGAAACAGGAAATCGCCGGCATGCAGCTTGAGCTCTATGTGCTGCGCTTCGAAAAGGAAAAGATGACGCTTCGCGTCCCCACCAACAAGGCCGAGTCGGTCGGCATGCGCAAGCTCTCGTCGGACAAGACGATGCGCGAGGCGATGGAGACGCTGAAGGGCAAGCCCAAGATCAAGCGCACCATGTGGTCGCGCCGGGCGCAGGAATATGAAGCGAAGATCAACTCGGGCGACCTCGTGTCGATCGCCGAAGTGGTCCGCGACCTGTTCCGCGCCGACGACCAGCCCGAGCAGAGCTATTCCGAGCGTCAGATCTTCGAAGGCGCGACCAGCCGTCTCGCCCGCGAACTGGCCGCGATGGAACAGATCGACGAAGGCGCCGCACAGGAGAAGATCCTCGAGATTCTCCGCAAGGCCGCTGCGATCTACAACAAGGAGAAGGTGCCGGCCTGA
PROTEIN sequence
Length: 178
MAAKALHFDVGDYVVYPKHGVGRVIELQKQEIAGMQLELYVLRFEKEKMTLRVPTNKAESVGMRKLSSDKTMREAMETLKGKPKIKRTMWSRRAQEYEAKINSGDLVSIAEVVRDLFRADDQPEQSYSERQIFEGATSRLARELAAMEQIDEGAAQEKILEILRKAAAIYNKEKVPA*