ggKbase home page

SCN18_14_9_16_R4_B_scaffold_8407_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 589..1350

Top 3 Functional Annotations

Value Algorithm Source
uracil-DNA glycosylase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B68E8F similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 252.0
  • Bit_score: 280
  • Evalue 9.40e-73
Sphingomonas taxi strain 30a NODE_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29875.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 256.0
  • Bit_score: 275
  • Evalue 4.30e-71
uracil-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 255.0
  • Bit_score: 271
  • Evalue 1.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGGGGCTGAGCAGATTTTCGACTGGAACAAGGCAGCGGCGAGCACGCTGGAATGGTGGCAGGCCGCCGGGGTCGACGTGCTCGCGAGCGACGAGCCTTTCGACTGGCTCGCTGCGCCCGAGCCCGAGGCGGAACCGCGCCCGGCCGAACAGCGCCCGGCGGAGCGCCGCGGCGAGGCGCCGCCCGCCGCGCCCGTGGCACAGCCGCTCGTCCTGCCGCCGACGCTGGAGGGCTTCCTCGCCTGGCGCCTCGGGGCGGACGCGCCCGAAGCGGCATGGGGCAGCGCCCTGGTCCCGGCGAGCGGGCCGGCGGTCGCCGATGTGATGATTTTGGTCGATTGCCCCGAGCGCGACGATAGCGATGCCCTGCTATCGGGCGAGCTGGCGCGACTGTTCGACCGGATGCTCGCCGCGATCGGGCTGGCCCGCACCGAAATCCATCTTGCCGCCGTCGCCGCAGCGCGCCCGATCGCCGGTCGCGTGCCGCGCGAAGCGGAGGCGGCGCTGTTTGAAATCACCCGCCACCATGTCGCGCTGGTCGCCCCGAAACGGCTGCTCGCGCTAGGAAATGCGGCGAGTCGTGCGTTGCTGGCGGCGGATGTCGCCGAGACCCGTGGGCGTTTGCATCTTCTTGAACATAAAGGTGGAAGAAAGACGGAGGTGGTGGCCAGCTATCACCCGCGTCTGTTGCGGGAACGCCCGGCCGCGAAGGCCGACGCGTGGAGGGACCTACAGTTGCTGATCGGGGGAATGCAGGCGTGA
PROTEIN sequence
Length: 254
MGAEQIFDWNKAAASTLEWWQAAGVDVLASDEPFDWLAAPEPEAEPRPAEQRPAERRGEAPPAAPVAQPLVLPPTLEGFLAWRLGADAPEAAWGSALVPASGPAVADVMILVDCPERDDSDALLSGELARLFDRMLAAIGLARTEIHLAAVAAARPIAGRVPREAEAALFEITRHHVALVAPKRLLALGNAASRALLAADVAETRGRLHLLEHKGGRKTEVVASYHPRLLRERPAAKADAWRDLQLLIGGMQA*