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SCN18_14_9_16_R4_B_scaffold_11145_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 650..1480

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J4A3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 275.0
  • Bit_score: 367
  • Evalue 1.10e-98
LysR family transcriptional regulator ynfL {ECO:0000313|EMBL:GAO55547.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 276.0
  • Bit_score: 368
  • Evalue 5.30e-99
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 277.0
  • Bit_score: 356
  • Evalue 5.50e-96

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
TTGGACCTTCGCCATCTGCGCTATTTCCTGTGTGTTGCCGAGGAGATGCATTTCGGCCGCGCGGCGCAGCGACTCGGCATCTCGCAGCCGCCGCTCAGCCAGCAGATTCGCGCGCTGGAGGATGAACTCGGCACGCGGCTGTTCGATCGCACCAGCCGCCGCGTGCGGCTGACCGAGGCGGGCGAATTGTTCGTGCCCGAGGCGCGCGCGACGCTGTCGCAAGCCGATCATGCGATCGAAACCGCGCGGCTCGCGGGGCGCGGCGAATTGGGCCGGCTGCGCATCGGCTTCACCTCGTCGGCGCCGTTCGTTCCGCTGATCGCCTCGACGCTCTATCGCTTCCGCGAAAATTATCCCGAGGTGCAACTGACGCTCAACGATCTCGCGCGCGACGCGCAGATCGAGGCGTTGCGCCGTGGTGCGCTCGATATCGCGTTGGTCCGCGGCATTCGCGCGCCCTGCCTGCCCGATGAGTTTTCCGCGCGCTGCATCCTCGAGGAGGATATGGTGGTGGCGGTGCGCGCCGGGCATTCGCTCGCCGACCGGCCGGACGACCCGACGATCGCCGATCTCGCGGGTATCCCTCTGGTGCTTTACGCGCCGTCGCTGGGGGCGGGGTTCAACGAATATTTCTATGGCCTGTGCCACGAGGCGGGGTTCGAGCCCGATATCGCGCATGAGGCGAGCAGCTTCGCCACCCTGCTCGGGCTGGTCGCCGCGGGCTTCGGCGCGACGATCCTGGCGCGCTCGCTGGAGCGGCTGCACCTCGAAAATGTCGTCTATCGCCGCCTCGCGACCCCGGTGCCGAGCCGCTTGTGGCTGGTCCACGGC
PROTEIN sequence
Length: 277
LDLRHLRYFLCVAEEMHFGRAAQRLGISQPPLSQQIRALEDELGTRLFDRTSRRVRLTEAGELFVPEARATLSQADHAIETARLAGRGELGRLRIGFTSSAPFVPLIASTLYRFRENYPEVQLTLNDLARDAQIEALRRGALDIALVRGIRAPCLPDEFSARCILEEDMVVAVRAGHSLADRPDDPTIADLAGIPLVLYAPSLGAGFNEYFYGLCHEAGFEPDIAHEASSFATLLGLVAAGFGATILARSLERLHLENVVYRRLATPVPSRLWLVHG