ggKbase home page

SCN18_14_9_16_R4_B_scaffold_6798_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2275..2439

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 55.0
  • Bit_score: 87
  • Evalue 7.20e-16
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 55.0
  • Bit_score: 87
  • Evalue 3.60e-15
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEX9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 55.0
  • Bit_score: 87
  • Evalue 4.30e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGAGCGATCTCCCCCATACGCCATTGCTTGACACGATCGCGGATCCGACCGCGCTGCGGCGTTTGCCGCCGGAGCGTTTGCGCGAGGTGGCGGACGAGCTGCGCGCGGAGACGATTTCGGCGGTGGGCCAGACCGGGGGGCATCTCGGTTCGGGGCTGGGCGTG
PROTEIN sequence
Length: 55
MSDLPHTPLLDTIADPTALRRLPPERLREVADELRAETISAVGQTGGHLGSGLGV