ggKbase home page

SCN18_14_9_16_R4_B_scaffold_6500_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2..664

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 238.0
  • Bit_score: 391
  • Evalue 6.00e-106
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F54E6 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 238.0
  • Bit_score: 395
  • Evalue 2.30e-107
pyruvate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 238.0
  • Bit_score: 391
  • Evalue 1.20e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
CTGACCGGGCGTGCCGCCGGCATCTCGAAGGGCAAGGGCGGCTCGATGCACACGTTCAGCGTCGAGCATAAATTCTACGGCGGGCACGGCATCGTCGGTGCGCAGGTGTCGCTCGGCGCCGGTCTCGGCTTCGCGCACAAATATTCCGGGGACGGCGGGGTGTGCCTCGCTTACTTCGGCGATGGCGCGGCCAATCAGGGCCAGGTCTACGAAGCGTTCAACATGGCCGAGCTGTGGAAGCTGCCGGTGATCTTCGTGATCGAGAACAACCAGTACGCCATGGGCACCTCGGTCAACCGGGCGTCGTCCGAAGACCAGCTTTATCGCCGCGGCGAAAGCTTCCGCATTCCCGGGCTGCAGGTCGACGGGATGGACGTGCTGGCGGCGCGCGGCGCGGCCGAGGAAGCGCTCGCCTGGGTGCGCGCGGGCAAGGGGCCGATCATCCTCGAGATGAAGACCTATCGCTATCGCGGCCATTCGATGTCCGACCCGATCGAACATGTGAAGAAGCTGCTCGAGGCCGAGGGCGTCAAGGAAGACGAACTGAAGGCGGTCGAGGTGGAAATCCGCCGGCAGGTCAACGAATCGGCCGATTTCGCGGAAAGCACCCCCGAACCCGAACCGCAGGAGCTGTATACCGACGTGCTGGTGGAGACTTATTGA
PROTEIN sequence
Length: 221
LTGRAAGISKGKGGSMHTFSVEHKFYGGHGIVGAQVSLGAGLGFAHKYSGDGGVCLAYFGDGAANQGQVYEAFNMAELWKLPVIFVIENNQYAMGTSVNRASSEDQLYRRGESFRIPGLQVDGMDVLAARGAAEEALAWVRAGKGPIILEMKTYRYRGHSMSDPIEHVKKLLEAEGVKEDELKAVEVEIRRQVNESADFAESTPEPEPQELYTDVLVETY*