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SCN18_14_9_16_R4_B_scaffold_6519_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1525..2550

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 301.0
  • Bit_score: 506
  • Evalue 2.00e-140
ribonuclease R n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B412E9 similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 309.0
  • Bit_score: 507
  • Evalue 8.40e-141
ribonuclease R similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 301.0
  • Bit_score: 506
  • Evalue 4.00e-141

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGAGTTATCTTGAAATTGTAAGAAATCACAACCCGCCCCATTATGGCGCTATCGCCGCCCGGCGGGGATTTATCCGCTTGGCGCGTGACGCTGGCGCGTTTCGCCCCTATTTCCGGCGGATGCGAAAACCCAAGGCCGGCTTGCCGACCCGCCAGCAGATTCTGGATTTCATCACGTCGAGCGACAGCCCCGCCGGCAAGCGTGAGATTGCGCGCGCCTTCGGCCTGACCGCGCAGGAGAAGATCGCGCTCAAGGCGCTGCTCAAGGACATGGCGGACGAGGGGCTGATCGATTCGGCGCCCGGCCGTGCTTTCCACCGCATGGGCGGGGTGCCCAAGGTCACGGTGCTGCGCATCGCCGATGTCGATGACGGCGGCAATGTCTGGGCGGTGCCCGAGCGCTGGGAGGCGGAAACCCCGCCGCCGCGGCTCCGGGTGCGCGAGCGCAAGCGCGGCGCGCTTGGCGTCGGCGCGCGTATCCTCGCGCGGACCGAGGAAGCGGGCAACGGCTGGATCGCGCATCCGATGAAGGCGTTGGCGCCTTCGTCCGAGCAACTGATCGGCGTGCTGCGCGGCGAGGGCGATCGCTTGTGGCTGCAGGGCGTCGAGAAGAAGGAACGGCGCGAATTTCCGGTATCCGACGCGGGTGGCGCGGTGGCCGGCGATCTGGTGCTGGCCGAGCGCGCCGGCCGCCCGCCGCGCTTCACCGCGCGGGTGGTGCAGAAGCTCGGCGATCCGTTCGCGCCGCGCAGCTTCTCGCTGATCGCGATCCACCAGTTCGATATCCCCGACAAATTCGCCGAAGCCGCGCTGGAGGAGGCGACCCGGGTCGCGCGCCAGCCGCTGGGCAGCGATCGCGAGGATCTGACGCATCTGCCGATCGTTGCGATCGACCCCGCCGATGCGCGCGATCACGACGATGCGGTATGGGCCGCGCCCGACGACGATCCCGGCAATGACGGCGGCTGGCAGGCGATCGTCGCGATCGCCGACGTCAGCTTTTACGTCCGCCCCGGATCGGCGCTC
PROTEIN sequence
Length: 342
MSYLEIVRNHNPPHYGAIAARRGFIRLARDAGAFRPYFRRMRKPKAGLPTRQQILDFITSSDSPAGKREIARAFGLTAQEKIALKALLKDMADEGLIDSAPGRAFHRMGGVPKVTVLRIADVDDGGNVWAVPERWEAETPPPRLRVRERKRGALGVGARILARTEEAGNGWIAHPMKALAPSSEQLIGVLRGEGDRLWLQGVEKKERREFPVSDAGGAVAGDLVLAERAGRPPRFTARVVQKLGDPFAPRSFSLIAIHQFDIPDKFAEAALEEATRVARQPLGSDREDLTHLPIVAIDPADARDHDDAVWAAPDDDPGNDGGWQAIVAIADVSFYVRPGSAL