ggKbase home page

SCN18_14_9_16_R4_B_scaffold_14821_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(814..1125)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent formate dehydrogenase gamma subunit (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 103.0
  • Bit_score: 163
  • Evalue 1.90e-38
ATP synthase subunit E n=1 Tax=Sphingobium xenophagum RepID=UPI00035E8FB9 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 103.0
  • Bit_score: 166
  • Evalue 1.10e-38
ATP synthase subunit E {ECO:0000313|EMBL:AJR23883.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 103.0
  • Bit_score: 169
  • Evalue 2.30e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Sphingomonas_18x → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
AGCCGCGCGGATGTGCATGGCGTCGTCACTTTCTATCACGATTTCCGCCGCACGCCGGCGGGGACGCATGTCGTCCGGCTGTGCCGCGCGGAAAGCTGCCAGGCGCGCGGCGCGGTGACGATCGAGCAGATCGCGACCCGCCGGCTCGGCGTGGCGATGGGCGCGACCAGCGCGGACGGGCGGGTGACGATCGAGCCGGTCTATTGCCTCGGCCTGTGCGCCACCGGCCCCAATGCATTGGTCGACGGCCGCCCGGTCTCGCGGCTCGATGCCGCCAAGATCGAGCGGATCGCCGCGGCGGTGCTGGCATGA
PROTEIN sequence
Length: 104
SRADVHGVVTFYHDFRRTPAGTHVVRLCRAESCQARGAVTIEQIATRRLGVAMGATSADGRVTIEPVYCLGLCATGPNALVDGRPVSRLDAAKIERIAAAVLA*