ggKbase home page

SCN18_14_9_16_R4_B_scaffold_14151_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(3..1178)

Top 3 Functional Annotations

Value Algorithm Source
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 392.0
  • Bit_score: 474
  • Evalue 7.40e-131
coproporphyrinogen III oxidase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A5B similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 386.0
  • Bit_score: 456
  • Evalue 1.50e-125
hemN; oxygen-independent coproporphyrinogen III oxidase similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 392.0
  • Bit_score: 423
  • Evalue 3.90e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
CTGGCCGACGTTGCTGTGGACGCACCGGTCTCGCTCTATCTTCACATCCCTTATTGCCACGAAATCTGCTGGTATTGCGGGTGCAACACCGGCGCGGCGAACCGCACGGGACGTGTGGCCGCCTATCTTGAGCGGCTGATCGAGGAAGCCAGGGCGGTCGCGCAGCAATTGGGCGGGCGCGGTCGGGTGGGCCGGATCGCGTTCGGCGGTGGCAGTCCCAACGCACTGGCGCCCGGGCAATTTGCCGCGCTGCTGGGCGAGGTGCGTGCCCTATTCGACTGCTCGGAGGCGATCGTCTCGGTCGAGCTCGACCCACGCCAGTTCGGGCCGGGCTGGGATGAGACACTGACAAGCGCTGGCGTGACCCGCGCCAGCCTTGGCGTGCAGACCTTCTCGCCCGACTTGCAACGCGCGATCGGTCGCATTCAGCCGGTGGCGATGATCGCCGACGTTACCGCGCGGCTGCGTGCGGCGGGGGTCAATTCGATCAGCTTCGACCTGATGTACGGTCTACCAGCGCAGGATGTGGCGCACTTGCGCGAGACGATCGACATAGCACTCGGCATGCACCCCGATCGGCTGGCGGTTTTCGGCTATGCGCATGTCCCGCATCTTATCCCTCGCCAGCGTCGCATCGATGCGTACGCGTTGGCGGGGCCCGAAGCACGTTTCCGACAGGCAGAAGCGGCGCACCTCATGCTGAAAGAGGCGGACTGGCAGTCGATCGGATTCGATCATTTCGCCCGCAGCGATGACGATCTCGCGCTGGCCGCCCGCTCCGGCACGCTCCGGCGCAATTTTCAGGGTTTCACCGATGACGATGCCGAGGTGTTGGTCGGGCTTGGAGCATCCGCGATCAGTATGTTTCCCGGACTGCTGGCTCAGAACGAGAAGAACGCGGGTCGCTATCAGTTGCGCATCGCACGCGGCGGGCTGGCGGCGGCGCGGGGTATCCGGCGGAGTCCGGTCGACCAGCGGCGTGGCGTTGCGATCGAGCAATTGCTGTGCCGCGGTAGTGCCGATCTGACGGGGCTGCCCGATCTGGCGACGATCCGCGAACGACTGGCGCCGTTTGCCGCGCGCGGGCTCGTCACATGGATGGGGACGCGGCTCAATCTGGCGCCGACCGCAACGCCTTATGCCCTCGCTATCGTCGCGACGATCGATCCCTATCGC
PROTEIN sequence
Length: 392
LADVAVDAPVSLYLHIPYCHEICWYCGCNTGAANRTGRVAAYLERLIEEARAVAQQLGGRGRVGRIAFGGGSPNALAPGQFAALLGEVRALFDCSEAIVSVELDPRQFGPGWDETLTSAGVTRASLGVQTFSPDLQRAIGRIQPVAMIADVTARLRAAGVNSISFDLMYGLPAQDVAHLRETIDIALGMHPDRLAVFGYAHVPHLIPRQRRIDAYALAGPEARFRQAEAAHLMLKEADWQSIGFDHFARSDDDLALAARSGTLRRNFQGFTDDDAEVLVGLGASAISMFPGLLAQNEKNAGRYQLRIARGGLAAARGIRRSPVDQRRGVAIEQLLCRGSADLTGLPDLATIRERLAPFAARGLVTWMGTRLNLAPTATPYALAIVATIDPYR